Sphingobium sp. EP60837: EP837_03859
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Entry
EP837_03859 CDS
T04432
Name
(GenBank) NADP-reducing hydrogenase subunit HndC
KO
K00124
formate dehydrogenase iron-sulfur subunit
Organism
sphb
Sphingobium sp. EP60837
Pathway
sphb00630
Glyoxylate and dicarboxylate metabolism
sphb00680
Methane metabolism
sphb01100
Metabolic pathways
sphb01120
Microbial metabolism in diverse environments
sphb01200
Carbon metabolism
Brite
KEGG Orthology (KO) [BR:
sphb00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00630 Glyoxylate and dicarboxylate metabolism
EP837_03859
09102 Energy metabolism
00680 Methane metabolism
EP837_03859
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Motif
Pfam:
Complex1_51K
NADH_4Fe-4S
SLBB
Motif
Other DBs
NCBI-ProteinID:
ANI80237
UniProt:
A0A173L288
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Position
pEP1:190825..192402
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AA seq
525 aa
AA seq
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MTRVFISRDMASVALGADDVARAFSNTGCEVIRTGSRGLFSIEPLVEVETAEGRIGYGPV
GPADAAAVLDGTHANMLGRVEELPFFAGQQRFTFARCGIVDPLSLADYAATSGWTGLEAA
RAMSQQAVVDAVKASGLRGRGGAGFPTGIKWQTVLDAASSTKFIVCNADEGDSGTFADRM
LMEGDPFCLIEGMAIAAHAVGARHGYIYIRSEYPYCITTMRAAIDACAHLIAPFTLEVRE
GAGAYVCGEETALLDSIEGKRGQVRAKPPLPALQGLFGQPTVINNVLSLAAVPFILTEGA
EAYAAVGFSRSRGTMPVQLAGNVKHGGLYEIGFGITLGELVNDIGGGTASGRPVRAVQVG
GPLGAYFPPSMFHLPFDYEAFAQAGGLIGHAGITVFDDSVDMAHMARFAMEFCAAESCGK
CTPCRIGSTRGVEIMDRIMARREQGSPRANPALPGGLAKALYSRSPSPMQQTVEQEISLL
RDLADTMKFGSLCALGGFTPYPVLSALDHFPEDFGATAPAKEAAE
NT seq
1578 nt
NT seq
+upstream
nt +downstream
nt
atgacgcgcgtgttcatcagccgcgacatggcctcagtcgcgcttggcgcggacgatgta
gcgcgggctttctccaatacgggctgcgaggtgatccgcaccggttcgcgcgggctattt
tcgatcgagccccttgtggaggtggaaacggccgaggggcggatcggctatggtccggtg
ggaccagcggatgctgctgccgtgctcgatggtacgcacgccaatatgcttggccgcgtg
gaggaattgcccttctttgccgggcagcagcgcttcacctttgcccgctgcggtatcgtc
gatccgctaagccttgccgactatgccgccacaagtggctggacagggctagaagcagcg
cgcgccatgtcgcagcaggcggtggtggatgccgtcaaggcctcgggtctgcgcggacgc
ggcggcgcgggcttcccgaccggcatcaagtggcagactgtgctggatgcggcctcctcc
acaaagttcattgtttgtaatgccgatgagggcgacagcggcacctttgccgaccgcatg
ctgatggagggcgatcccttttgcctgatcgaaggcatggcaattgccgctcatgccgtc
ggagcgcgccatggctacatctatatccgcagcgaatatccctactgcatcaccacgatg
cgcgccgcgatcgacgcctgcgcgcatctgatcgcgcccttcacgctggaggtgcgcgaa
ggggccggggcctatgtctgcggcgaggagacggcgctcctcgacagtatcgagggcaag
cgcggccaggtgcgcgccaagccgccgctgcccgccttgcaggggctgtttggccagccc
acggtcatcaacaatgtgctgagcctggccgccgtgccattcatcctgacggaaggggca
gaggcctatgcggcggtcggctttagccggtcgcgcggcaccatgccggtgcagcttgcc
ggtaatgtgaagcatggcggcctttacgagatcggctttggcatcacgctcggcgaactg
gtgaatgacattggtggtgggaccgcgagcggccgcccggtccgcgcggtacaggtgggt
ggaccgctaggtgcttatttcccgccaagcatgttccatctgcctttcgactatgaagct
ttcgcccaggcgggaggactgatcggccatgccgggatcaccgtcttcgacgacagtgtc
gatatggcgcatatggcgcgctttgcgatggagttctgtgcagccgaaagctgcggcaaa
tgtacgccctgccgcatcggatcgacgcgcggtgtcgagatcatggacaggatcatggcg
cgcagggagcaggggtcgccgcgggctaatccagcgctgcccggcggccttgccaaggca
ctctattcgcgttcaccctcgcccatgcagcagacggtggagcaggagatcagcttgttg
cgagatctcgccgatacgatgaaatttggttcgctctgcgcgctggggggctttacgccc
tatccggtgctgagcgcgctcgaccatttccccgaggatttcggcgccaccgcgcctgct
aaggaagctgcggaatga
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