Sphingomonas psychrotolerans: CVN68_19130
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Entry
CVN68_19130 CDS
T05307
Name
(GenBank) hypothetical protein
Organism
sphc
Sphingomonas psychrotolerans
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Motif
Other DBs
NCBI-ProteinID:
ATY33809
UniProt:
A0A2K8MPA3
LinkDB
All DBs
Position
complement(4185679..4190319)
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AA seq
1546 aa
AA seq
DB search
MNARISNLARTSPRRRTVSRLAALATSASLAAIASPAYAQCVEGPPANFTCAGATDVPQI
IVTDDATVTTVPGFSIDASGNGNGLALQVSGDGLISFEGPGELIGSGVRFSTTGSSAASA
GELLVSSNGNILANGAIGLGLDNAGGGATSVHWQGSIVNSGGHGIYAGSSPGAGDLVLVI
NEVTARGDGVWAQYNSDESVMITALGPVIGRDGVGVRIDAGASAASVELNVTDATGGTDG
IAINNMGTNITTIDAGGVVTGLSGAGIIVETGTDALTVAVHAAQVNGQTAGIQVSNNGVR
DTDIIATGQVAATTSAGINAINGSSARDISIAAADVVGLLGVNASNGGTGSTTLVTTGTV
VGFGSDGIRATASVDATNILVDAHNVEGDRVGISVHNDGTGTTAVRASGTVVGQNADGID
VITTQSFQGTTVDAVNVTGYNGIYVDNNGGGSNHVTATGTVTGNGATGDGILVNNQTGGA
DIRVAAVDVSGGRRGISVENYGTETLIATTGLVTGGESGIFALNGVATTDLTIRTASVRG
EDQGILTEHFGTGRTVILAGGPVTGVNGAGILVNADGAGAVDVIAGDVTGGSRGISIFNS
GTGTTRVDASGTVTGLGAAGLAIRNSGSATGIEVRAAAVNGQTLGIEAENFGSGNTTIAA
TGFVAGATNAGVRAHNSLGAADISITASDVAGAIGILATSDGTGATSVVSSGAVVGFGHD
AIHVSTAATTTNVLVDVFDAEGLQSGIQIDNLGTGTTTVHSSGTVTGQVFSGIQIETGTS
AQDVIVDAVNVTGTSGINVRNFGTGSASVGATGAVTGTEADAAGIVVVGGTGSLDLRVSA
VTVEGGAVGIDTSNQGSGQTFIATTGQVKGGDSGIVARNGLGATDLTILATDVWGASNGI
VAENLGSGDMDVTATGNVFALDQMGIRLSAGAGSGDVTLKVGSTIGDLNGVSIVNAGLGE
TRVRIDGVARGGTNAIEVFSSAGQDVTIVNNGTVRNMSGQSADEAIRATGGSTGIGNTGT
LLGTLAISGGSSVVANTGSWRSIGGVSSFGTADDQLFNTATGTIVGGLLSGAAESTVWQG
LERFQNNGVLKLQDGGVGDILQTSAATTFANGSVLNVDIAGTSGADSFRTTGTVAIDAGS
RLQAVTTQPLVLHGKYVVVQADGGLTGQFAFEDKLLTAFAGLRDGYTPTSAFLEFAQLKA
LAGAGLTPNQKAAAGGADSLPDGNALKDALLLLPTDAAAQAAFDQLSGEIHPSARNAMVE
DSRLIRGAVLGRLADGEGSGLWGRLFAASGISDGDSNAAALDRDTKGGVLGLDRSLGPVT
VGVAGGWSDTSLRIARRDSNGSIESIHGVVYAGGRFGPFGLRGGAGYARTSTETTRRIAF
AAISATPTADYHGSVLQGFVEAGYRVPLGGGHVEPFASLTAIRAKTDAFTEADGPAALSG
TAISEKTMSTMLGARFETSPAGAFSLRGTAGWRHAWGDLDPAGRHAFAGGTPFTVLGAAG
SKNAGVFDVEARYRISPSVTLSVGYNGVLGARNADHAITGAFKIVF
NT seq
4641 nt
NT seq
+upstream
nt +downstream
nt
atgaacgctcggatctcgaacctcgctcgcaccagtccacgccgcaggaccgtgtcgcgg
ctcgcagcactcgccacctcagcaagcctcgcagcgatcgcatcgccagcgtacgcccag
tgcgtcgaaggcccgccggccaacttcacctgcgcaggcgcgaccgacgtcccgcagata
atcgttaccgatgatgcgacggtgaccaccgttcccggcttttcgatcgacgccagcggc
aatggcaatggcctcgccttgcaggtctccggcgacgggctgatcagcttcgaaggcccg
ggcgaactcatcggctcgggcgtgcgcttctcgaccaccggaagcagcgccgcatccgcc
ggagaacttctggtatcctcgaacggcaacatcctggccaatggcgccatcggacttggt
ctcgacaatgccggcggcggcgccacctccgtccattggcaggggtcgatcgtgaacagc
ggcggccacggcatatatgccggcagctcgcctggcgcaggggacctcgttctggtcatc
aatgaggtgaccgcccgcggtgacggtgtctgggcacagtataattcggatgaatcggtc
atgatcaccgccctcggcccggtcattggacgcgacggcgtgggcgtgcggattgatgcc
ggcgcgtcagctgcgagcgtcgaactgaatgtgaccgacgcaactggcggcaccgacggc
atcgcaatcaacaacatgggcacgaacatcaccacaatcgacgccggcggggtggtcaca
gggctcagcggggcaggcatcattgtagaaaccggcacagacgccctcacggttgcagtt
catgcggcgcaggtgaacggccagaccgccggcatccaggtcagcaacaacggggttcga
gacaccgatatcattgcgaccggccaggtggccgccaccacttcggcaggcataaacgcc
atcaacgggagcagcgcccgggacatctcgatcgcagccgccgacgtcgtgggtttgctg
ggcgtcaatgcatccaacgggggaaccggttcgaccacactggtcacgaccggtactgtc
gtcggtttcggatcggacggaattcgcgcaaccgccagcgtcgatgcgaccaacatcttg
gtggacgctcataatgtcgagggcgatcgcgtcggaatctcggtgcacaatgatggaacc
ggcacaaccgcagtccgcgccagcggaaccgtggtgggtcagaacgccgacgggattgac
gtcatcacgacgcagtcctttcagggcactacggtggatgcggtcaacgtcaccggctat
aacggaatctacgttgacaataatggcggcggttccaaccatgtaaccgctacgggcacg
gtcaccggcaacggcgcgaccggagacggcattctggtcaacaaccagactggtggagcc
gatatccgcgttgcggcagtcgacgtgtcgggtgggcgacgcggcatcagcgtcgaaaac
tacggcaccgagactttgatcgcgacgacgggtctggtcaccggcggcgaatccggcatc
tttgcgttgaatggcgttgccacgaccgacctgacaattcgcactgccagcgtgcgtggc
gaggatcagggaattctcaccgaacatttcggaacgggccgaacggtgatccttgcaggt
ggtccggtgaccggcgtcaacggcgcgggaattctcgtcaatgcggatggtgccggcgcg
gtggatgtgattgccggggacgtaaccggaggaagccgtggcatttcgatcttcaactcc
ggcacgggcaccacgagggtcgatgcaagcggcacagtgaccggcctgggcgcggccggg
ctcgcgatcaggaatagcggcagcgccacgggaatcgaggttcgggccgctgccgtgaac
gggcaaacgctcggcatcgaggcggagaatttcggatccggcaacacgaccatcgccgcc
acaggtttcgtggcgggagctaccaacgcgggcgtaagagcccataacagcctcggcgcg
gccgatatctcgatcacggcgagcgatgtcgccggagcgatcggtatcctcgccaccagc
gacggcaccggggcgaccagcgttgtgtcgagcggcgccgtcgtgggctttggccatgac
gccattcacgtcagcaccgcggccaccaccaccaatgtgctcgtcgacgtgttcgatgcg
gaaggcctccagtcgggaatccagatcgacaatctcggaaccggcacgacaaccgtccat
tccagcggcaccgttacaggtcaggtcttcagcgggatccagatcgagacgggcacctct
gcgcaggatgtgatcgtcgatgctgtgaacgtgaccgggacgtccggcatcaatgtgcgg
aacttcggcaccggttcggccagcgtcggcgccaccggcgccgtcacgggcactgaggcg
gacgccgcaggcatagtggtggtcggcggcaccggatcgttggacctccgcgtttcagcc
gtgacggtcgaaggcggcgccgttggcatcgatacgagcaatcagggcagcggccagacg
ttcattgccactaccggacaggtcaagggcggcgactccggcatcgtcgctcgcaatggc
cttggcgctactgatctgacgatcctcgcaaccgatgtttggggcgccagcaacggaatc
gtcgccgagaatctcggcagcggcgacatggatgtgaccgcgacgggcaatgttttcgcg
ctggatcagatgggcatccgcctttcggccggcgcaggttcgggcgatgtcactctcaag
gtgggcagcacgatcggcgacttgaacggcgtttcgatcgtcaacgccgggctaggcgag
acgcgagtccgcatcgacggcgtcgcgcggggcggaacgaacgcgatcgaggtcttttcc
agtgctggccaggacgtgaccatcgtcaacaacggtaccgtacggaacatgtcgggccaa
agcgccgacgaagcaatccgcgccactggcggatcgaccggtatcggcaataccggcaca
ctgttgggtacgctcgccatttcgggtggcagcagcgtcgtggccaataccggaagctgg
cggagcatcggcggggtcagcagcttcggcacggccgacgaccagctgttcaacaccgcg
acgggcacgatcgtcggcggattgctgtcgggagcggcggaatcaactgtttggcagggg
ctcgagcgtttccagaacaatggcgtgctcaagcttcaggacggcggcgtcggcgacatc
ctccagacctcggcagccaccaccttcgccaacgggtcggtgctgaacgtcgacattgcc
ggaacgagcggcgcggacagtttccgcaccaccgggacggtcgcgatcgacgccggcagc
cgactgcaggcagttactacccaaccgctggtgctccacggaaaatatgtcgtggtgcag
gccgatggggggctgaccggccagttcgccttcgaggacaagctgctgacggcgtttgcg
ggactgcgcgacggctatacgccaacctcggcgtttctcgaattcgcccagctcaaggct
ctcgcgggcgccgggctcacgcccaaccagaaggcagcagcgggcggggctgacagtctg
cccgacggcaatgcgctgaaggacgcgctactgttgctgcccactgacgccgcggcacag
gcggccttcgatcagctctccggcgagatccacccctccgcgcgcaacgccatggtcgag
gacagccggctgattcggggcgccgtgctcggccgtctggccgatggcgagggttcgggg
ctgtggggacgattgttcgccgcttcggggatcagcgacggcgactctaacgccgccgct
ctcgatcgcgatacgaagggaggcgtgctcggactagatcgcagcttgggtccggtgacc
gtcggggtggcgggaggctggtccgacaccagtctccgcatcgcgcgccgcgacagcaac
ggctcgatcgagagcatccatggtgtggtatatgccggggggcgcttcgggccgttcggg
ctgcgtggcggggccggctatgcccgtacctccaccgagaccacgcgccggatcgccttt
gcggcgatcagcgcgacaccgactgccgattatcacggctcggtgctgcagggctttgtc
gaggcgggctatcgagtgccgctggggggcgggcatgtcgagccgttcgccagcctgacc
gcgatccgcgcgaagaccgatgccttcaccgaggccgacggcccggcggcgctgtcgggc
actgcgattagcgaaaagacgatgagcacgatgttgggcgctcgcttcgagaccagtccg
gccggcgccttctcgttgcgcggcaccgcaggttggcgccatgcctggggcgatctcgac
ccggccggccgccacgcttttgccggcggcactccttttactgtcctcggtgccgcagga
tcgaagaatgcaggcgtgttcgacgtcgaggcgcgctatcggatctccccgagcgtcacg
ctgagtgtcggctataacggcgtcctcggcgcccgaaatgccgaccacgcaatcaccggg
gccttcaagatcgtcttctga
DBGET
integrated database retrieval system
