Rhizorhabdus wittichii DC-6: HY78_03675
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Entry
HY78_03675 CDS
T05200
Name
(GenBank) lytic transglycosylase
KO
K08309
peptidoglycan lytic transglycosylase [EC:
4.2.2.29
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
HY78_03675
Enzymes [BR:
sphd01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.2 Acting on polysaccharides
4.2.2.29 peptidoglycan lytic transglycosylase
HY78_03675
Peptidoglycan biosynthesis and degradation proteins [BR:
sphd01011
]
Peptidoglycan biosynthesis and degradation
Lytic transglycosylase
HY78_03675
BRITE hierarchy
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SLT
Motif
Other DBs
NCBI-ProteinID:
ARR52605
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All DBs
Position
757671..759443
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AA seq
590 aa
AA seq
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MMRRYLLAGAIALAPFTAAAQNAVAVPAAAVGLAAAAQPLPIVSGLTADQRTAYRTIFAA
IRSGDWSAAQAGIDAIPTGPLSNVAEAELILAKGSPRISDDQLIQLVATAPDLPQAAQLA
GLASRRGLTTAALPVTRDLVRYAGPSKRQSARSLRSDRAAAALAQVATPLLRDDRPSEAE
ALVVDRLGQLSAEAQTEWLQRVSWAYYLSGDDASARRVADQARPGAGDWAVQASWVSGLA
AWRQHDCQSAGTAFEEVAGRARDPEMTAAGLYWASRADMACGHPERIEPRLRSAARMKES
FYGLIAQAALGIADESGASMKLTANDWASIGAIANVRRATALAEIGETGLAEEMLRHQAK
IGLSRDHESLIHLAARLDLPAAQIWLAQNGPSGAQLSAAARYPMPAWTPASGWQVDKALV
FAHALQESRFKTDAVSSAGARGVMQLMPATAQMVARHLGRTVDPASLFQPATSIDLGQAY
LRELADNSGTGGLLPKVIAAYNAGPGSVANWNARGRSLDDPLLFIESIPFAETRAYVAVV
LRNYWMYQRHSGAKAASLTAISQGLWPRFPGMPGRDAVRLTALGATAAAD
NT seq
1773 nt
NT seq
+upstream
nt +downstream
nt
atgatgcgtagatatctgcttgccggcgcgatcgccctcgcccccttcaccgccgccgcc
cagaatgcggtggccgtgcccgctgccgcggtcggcctcgccgccgccgcccaaccgctg
ccgatcgtgtcgggcctcaccgccgaccagcgcaccgcctatcgcacgatctttgccgct
atccggtccggcgactggagcgccgcccaggccggcatcgacgcgatcccgaccggaccg
ctcagcaacgtcgccgaagccgagttgatcctcgccaagggatcgccgcgtatctcggac
gatcagctcatccagctcgtcgccaccgcgcccgatctgccgcaggccgcccagctcgcc
ggcctcgcctcccgccgcggcctcaccacggcggcgctgccggtcacccgcgatctcgtc
cgctacgccggcccctcgaagcgccagtcggcccggtcgctgcgcagcgaccgggccgcg
gcggcgctggcgcaggtcgcgacgccgctgctgcgcgacgaccggccgagcgaggccgag
gcgctggtcgtcgatcgcctgggccagctctcggccgaggcgcagaccgaatggctacag
cgcgtctcctgggcctattatctgtcgggcgacgacgcctccgcgcgccgcgtcgccgat
caggcgcggcccggcgccggcgactgggcggtgcaggcgagctgggtctcgggcctcgcc
gcctggcggcagcatgactgccagtccgccggcaccgccttcgaggaggtcgccggccgc
gcccgcgatccggagatgacggccgccggcctctattgggcgagccgcgccgacatggcc
tgcggccatcccgagcggatcgagccgcgcctgcgctccgccgcgcggatgaaggagagc
ttctacggcctgatcgcgcaggccgcgctgggcatcgccgacgagagcggcgcgagcatg
aagctcaccgccaacgactgggcgtcgatcggcgcgatcgccaatgtccgccgcgcgacc
gcgctcgccgagatcggcgagaccggcctcgccgaggagatgctccgccaccaggcgaag
atcggcctcagccgcgaccatgaatcgctgatccacctcgccgcccggctcgaccttccg
gccgcgcagatctggctggcgcagaacggcccgtcgggggcgcagctctcggcggcagcg
cgctatccgatgccggcctggaccccggcctcgggctggcaggtcgacaaggcgctggtc
ttcgcccacgcgctccaggaatcgcgcttcaagaccgatgcggtcagctcggccggcgcg
cgcggggtgatgcagctcatgcccgccaccgcgcagatggtcgcgcgccacctcggccgc
accgtcgatccggcgtcgctgttccagcccgcgaccagcatcgacctcggccaggcctat
ctgcgcgaactggccgacaatagcggcaccggcgggctgctgcccaaggtgatcgccgcc
tacaacgccgggcccggctcggtcgccaactggaacgcgcgcggccgcagcctcgacgac
ccgctgctgttcatcgaatcgatccccttcgccgagacccgcgcctatgtcgcggtcgtg
ctgcgcaactactggatgtaccagcggcacagcggcgccaaggccgccagcctgaccgcg
atctcgcagggcctgtggccgcgcttccccggcatgcccggccgcgacgccgtccgcctg
accgcgctgggcgcgacggcggcggcggactga
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