Rhizorhabdus wittichii DC-6: HY78_04450
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Entry
HY78_04450 CDS
T05200
Name
(GenBank) ribosomal RNA small subunit methyltransferase H
KO
K03438
16S rRNA (cytosine1402-N4)-methyltransferase [EC:
2.1.1.199
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphd03009
]
HY78_04450
Enzymes [BR:
sphd01000
]
2. Transferases
2.1 Transferring one-carbon groups
2.1.1 Methyltransferases
2.1.1.199 16S rRNA (cytosine1402-N4)-methyltransferase
HY78_04450
Ribosome biogenesis [BR:
sphd03009
]
Prokaryotic type
rRNA modification factors
16S rRNA modification factors
HY78_04450
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Methyltransf_5
Methyltransf_11
Methyltransf_25
GIDE
Motif
Other DBs
NCBI-ProteinID:
ARR52750
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All DBs
Position
923872..924840
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AA seq
322 aa
AA seq
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MTTTAPHVPVLIDEVIAGLEPATGETHVDGTFGAGGYTRALLQAGARVYAFDRDPDAIAE
GRALEDGQDGRLILVPERFSRMAEALNERGIDQVDGVTLDIGVSSMQLDRADRGFSFQAD
GPLDMRMEKSGMSAADFVNTADEAEIADVLHDLGEEPRARRVARAIVQARPITRTSELAE
VVRRALGHKPHEKKDPATRTFQAIRIHLNAELDELEQGLAAAERVLRPGGRLAVVSFHSI
EDRIVKRFLRDRSGATPAGSRHLPDARAGGPRPSFEAVAKPVRAGEAELARNPRSRSATL
RVARRTAAAPWGTAPKKEGRQG
NT seq
969 nt
NT seq
+upstream
nt +downstream
nt
atgaccacgaccgcgccccacgtccccgtcctgatcgacgaagtgatcgccggcctcgaa
cccgcgaccggcgagacccatgtcgacggcaccttcggcgccggcggctatacccgcgcg
ctgctgcaggcgggcgcgcgcgtctatgcgttcgatcgcgatcccgacgcgatcgccgag
ggccgcgcgctggaagacgggcaggacggccggctgatcctggtccccgaacgcttctcc
cgcatggccgaggcgctaaacgagcgcggcatcgaccaggtcgacggcgtgacgctcgac
atcggcgtgtcgtcgatgcagctcgaccgcgccgaccgcggcttctccttccaggcggac
ggcccgctcgacatgcggatggagaagagcggcatgagcgccgccgacttcgtcaacacc
gccgacgaggccgagatcgccgacgtcctgcacgacctgggcgaggagccgcgcgcgcgg
cgcgtcgcccgcgccatcgtccaggcccggccgatcacgcggacctccgaactggccgag
gtcgtgcgccgcgcgctcggccacaagccgcacgagaagaaggaccccgcgacccgcacc
ttccaggcgatccgcatccacctcaatgccgagctcgacgagctcgagcaggggctggcc
gccgccgagcgcgtgctgcgcccgggcggccggctggcggtcgtctccttccattcgatc
gaggaccggatcgtgaagcgcttcctgcgcgatcgcagcggcgccacgccggccggttcc
cgccaccttccagatgcgcgcgccggggggccgcgtcccagcttcgaggctgtcgccaaa
cccgttcgcgcgggcgaggcggaactcgcccgcaacccccggtcccgttcggcgacgctg
cgcgtcgcccggcggaccgcagcagcgccatggggcacggcgcccaaaaaggaaggacgt
cagggatga
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