Rhizorhabdus wittichii DC-6: HY78_20565
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Entry
HY78_20565 CDS
T05200
Name
(GenBank) LPS biosynthesis protein WbpP
KO
K02473
UDP-N-acetylglucosamine/UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase [EC:
5.1.3.7
5.1.3.45
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd00520
Amino sugar and nucleotide sugar metabolism
sphd00541
O-Antigen nucleotide sugar biosynthesis
sphd01100
Metabolic pathways
sphd01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09100 Metabolism
09101 Carbohydrate metabolism
00520 Amino sugar and nucleotide sugar metabolism
HY78_20565
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HY78_20565
Enzymes [BR:
sphd01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.7 UDP-N-acetylglucosamine 4-epimerase
HY78_20565
5.1.3.45 UDP-N-acetyl-alpha-D-glucosaminouronate 4-epimerase
HY78_20565
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Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_10
NAD_binding_4
RmlD_sub_bind
adh_short
NmrA
KR
Motif
Other DBs
NCBI-ProteinID:
ARR55665
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Position
4304234..4305262
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AA seq
342 aa
AA seq
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MTMDLDRMLRSRQARWLVTGAAGFIGSHLVQTLLAAGQSVRGLDNFATGHRSNLENVREQ
VGEDAWARFDFIEGDIRDRADCAAAVAGIDHVLHQAALGSVPRSIADPLSSHDTNATGFA
NIIDAARLAGVGSFVYASSSSVYGDEPNLPKVEGRIGRVLSPYALTKLHNELVAEVYRRN
YGFGSVGLRYFNVFGPRQDPNGAYAAVIPRWTAAMIAGEPVLINGDGETSRDFCYVANAV
QANLRAALFAPAGEAHLLNVAVGDRTTLSELFALLRDALRRDGVVYDRPAEHGDFRVGDV
RHSLADIGAAAELVGYAPTHRIAEGLDEALPWYRHLAKTEAL
NT seq
1029 nt
NT seq
+upstream
nt +downstream
nt
atgaccatggatctcgaccgcatgctccgctcccgccaggcccgctggctggtcaccgga
gccgccggattcatcggttcgcacctcgtccagacgctgctcgcggcggggcagtcggtg
cgcggtctcgacaacttcgcgaccggccatcgcagcaacctggagaatgtgcgcgagcag
gtgggcgaggatgcctgggcgcgcttcgacttcatcgagggcgacatccgcgaccgggcg
gactgcgcggcggcggtcgccgggatcgatcatgtgctgcaccaggcggcgctgggttcg
gtgccgcgctcgatcgccgatccgctgtcctcgcacgacaccaatgccaccggcttcgcc
aacatcatcgacgccgcccggctcgccggggtcggcagcttcgtctacgcttcgtcgagc
tcggtctatggcgacgagcccaaccttcccaaggtcgagggccggatcggccgggtgttg
tcgccctatgcgctgaccaagctccacaacgaactggtcgccgaggtctatcgccgcaac
tacggtttcggatcggtcggcctacgctatttcaacgtcttcggcccgcgccaggacccg
aacggcgcctatgcggcggtgatcccgcgctggaccgcggcgatgatcgcgggcgagccc
gtcctgatcaacggcgacggcgagacaagccgcgacttctgctacgtcgccaatgcggtg
caggccaatctgcgcgccgcgctgttcgcgccggccggggaggcgcatctgctcaacgtc
gcggtcggcgaccggaccaccttgtccgagctgttcgcgctgctccgcgacgcgctgcgc
cgcgacggggtggtctatgaccgtccggccgagcatggagatttccgcgtcggcgacgtg
cgccattcgctggcggacatcggcgccgcggccgaactggtcggctatgcgccgacccac
cggatcgccgaaggattggacgaggcattgccctggtatcggcacctcgccaagacggag
gcactttag
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