Rhizorhabdus wittichii DC-6: HY78_27070
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Entry
HY78_27070 CDS
T05200
Name
(GenBank) primosomal protein N'
KO
K04066
primosomal protein N' (replication factor Y) (superfamily II helicase) [EC:
5.6.2.4
]
Organism
sphd
Rhizorhabdus wittichii DC-6
Pathway
sphd03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
sphd00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
HY78_27070
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphd03400
]
HY78_27070
Enzymes [BR:
sphd01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
HY78_27070
DNA repair and recombination proteins [BR:
sphd03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
HY78_27070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
PriA_C
PriA_3primeBD
ResIII
PriA_CRR
Helicase_C
zinc-ribbons_6
AAA_30
AAA_22
Motif
Other DBs
NCBI-ProteinID:
ARR56839
LinkDB
All DBs
Position
5759992..5762160
Genome browser
AA seq
722 aa
AA seq
DB search
MARAHVLLLNPALGPLDYRADREHVVEPGSIVLAPLGPRQMVGVVWEEETLPSADQVGDN
RLRPLLDVYDVPPLAAPLRRLIEWTSDYYLAPPAAVLRMALPSSSALDGARTIVEYRATG
ERPGRMTSQREQALDRIGQRQGLIRELATIADVSEGVIRGLVKSGAIEAVTVSIDTPWDA
PDPDHKAVELSDEQQLAAGMLAEAVAAKRFQPFLLDGVTGSGKTEVYFEAVAEALRAGRQ
TLVLLPEIALTEPFLKRFEARFGHLPVAWHSELRQSQRRRAWRGIVHGEAKVVVGARSAL
FLPYRDLGLIIVDEAHETSFKQEDGVLYHARDVAVMRAKLEEIPIVLASATPAIETRQQA
AIGRYTELKLTARHGAAEMPEIEAIDLLADPPPRGRWIAPTLVRALADRLEKKEQSLLFL
NRRGYAPLTLCRTCGHRFQCPNCTAWMVEHRLLGRLQCHHCGHSMAPPAECPECKDEDSL
VACGPGVERIADEVAALFPDARVAIATSDTLSTPARAAEFVERMEAGDIDVVVGTQLVTK
GYHFPELTLVGVIDADLGLSGGDLRAAERSFQQIAQVAGRAGRGAKPGHVYIQTHAPKAP
VIQALLSGDAQSFYTAETEARKIAEAPPFGRYAAIIISAEKLEAAATTARLIGRTAPAID
GMHVYGPAPAPLAMLRGRHRQRLLVHARRSLDVQQVIRDWLGPLQWPRGVRVAVDVDPYS
FL
NT seq
2169 nt
NT seq
+upstream
nt +downstream
nt
atggcccgcgcccatgtcctcctgctcaaccccgccctcgggccgctcgactatcgcgcc
gaccgcgagcatgtcgtcgagccgggcagcatcgtgctcgcgccgctcggcccccggcag
atggtcggcgtggtctgggaggaggagacgctgccctcggccgaccaggtcggcgacaac
cggctccgcccgctgctcgacgtctacgacgtcccgccgctcgccgccccgctgcgccgg
ctgatcgaatggacctccgactattatctggcgccgcccgccgcggtgctgcggatggcg
ctgccctcctccagcgcgctcgacggcgcgcggacgatcgtcgaatatcgcgcgaccggc
gagcggccgggccggatgacctcgcagcgcgagcaagcgctcgaccggatcggccagcgc
cagggcctgatccgcgagctggcgacgatcgccgacgtgtccgagggcgtgatccgcggc
ctcgtcaagtcgggcgcgatcgaggcggtgacggtgtcgatcgacacgccgtgggacgcc
cccgatcccgaccataaggcggtcgagctgtcggacgagcagcagctcgccgccggcatg
ctcgcggaggcggtcgcggcgaagcgcttccagcccttcctgctcgacggcgtcaccgga
tcgggcaagaccgaggtctatttcgaggcggtcgccgaggcgctgcgcgccggccggcag
acgctggtgctgctgcccgagatcgccctgaccgaacccttcctcaagcgcttcgaggcg
cgcttcggccatctccccgtcgcctggcacagcgagctgcgccagtcgcagcggcggcgc
gcctggcgcggcatcgtccatggcgaggcgaaggtcgtcgtcggcgcgcgatcggcgctg
ttcctaccctatcgcgaccttggcctgatcatcgtcgacgaggcgcacgagaccagcttc
aagcaggaggacggcgtcctctaccatgcccgcgacgtcgcggtgatgcgcgccaagctg
gaggagatcccgatcgtgctcgcctcggcgacgccggcgatcgagacgcgccagcaggcg
gcgatcggccgctacaccgaattgaagctcaccgcgcgccacggcgccgccgagatgccg
gagatcgaggcgatcgacctgctcgccgatccgccgccgcgcgggcgctggatcgcgccg
acgctggtgcgcgcgctggccgaccggctggagaagaaggagcaaagcctgctcttcctc
aaccggcgcggctatgcgccgctgacgctgtgccggacctgcggccaccgcttccaatgc
cccaactgcaccgcctggatggtcgagcaccggctgctcggccggctgcaatgccaccat
tgcgggcacagcatggcgccgcccgccgaatgcccggagtgcaaggacgaggacagcctg
gtcgcctgcggccccggcgtcgagcggatcgccgacgaggtcgcggcgctgttccccgac
gcgcgggtggcgatcgccacctccgacacgctctccaccccggcccgcgccgccgagttc
gtcgaacggatggaggcgggcgacatcgacgtggtggtcggcacccagctcgtcaccaag
ggctatcatttccccgagctgaccctcgtcggggtgatcgacgccgatctcggcctgtcg
ggcggcgacctgcgcgcggccgagcgcagcttccagcagatcgcccaggtcgccgggcgc
gccggacgcggcgccaagcccggccatgtctatatccagacccacgcgcccaaggccccg
gtgatccaggcgctgctctcgggcgacgcgcagagcttctacacggccgagaccgaggcg
cggaagatcgccgaggcgccgcccttcggccgctacgccgcgatcatcatttcggccgag
aagctggaggcggcggcgaccaccgcgcggctgatcggccggaccgcgcccgccatcgac
ggcatgcacgtctacggccccgcccccgccccgctcgccatgctgcgcggccgtcaccgg
caacgcctgctggtccacgcccgccgctcgctcgacgtccagcaggtgatccgcgactgg
ctcggcccgctgcaatggccgcgcggcgtccgcgtcgcggtcgacgtcgatccgtatagc
ttcttgtag
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