KEGG   Rhizorhabdus wittichii DC-6: HY78_29805
Entry
HY78_29805        CDS       T05200                                 
Name
(GenBank) P-type conjugative transfer protein TrbL
  KO
K07344  type IV secretion system protein TrbL
Organism
sphd  Rhizorhabdus wittichii DC-6
Pathway
sphd02024  Quorum sensing
Brite
KEGG Orthology (KO) [BR:sphd00001]
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    HY78_29805
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02044 Secretion system [BR:sphd02044]
    HY78_29805
Secretion system [BR:sphd02044]
 Type IV secretion system
  Trb secretion system protein
   HY78_29805
SSDB
Motif
Pfam: TrbL
Other DBs
NCBI-ProteinID: ARR57695
LinkDB
Position
pDC03:59277..61001
AA seq 574 aa
MPSPANTDILTKFLDAYSSAIDSGFGLINSDVMGIMSIVATIALALAAIFWALDENGRIT
SELFRKALLFGFFLWLVNDWKGLSWTVVKGFTALGLKAGGSGMGVDAFLDKPGNIVKFGF
DHVIAMGNVIKSMTGPVAFFDNFAAIIIIAFAAIGTIAAFFVIAVQLVVTLIEFRLVTLA
AFVLIPFGVLKQTSFLTERALGYVVSSGLKLMTIALIVTIGGKTFNNITLVAPGNPDLAT
TQALSILLAAILLMMLSLVVPAIANALVAGGPQLGGGAALAGAAGVAAAAGGAYLAGRGA
IGAGRAAMGAPAAMAAKAQAAAGAIREGAKSGIPPLGGFGSGTMGPAPGPSSGGGGGGGG
GGGTPSPSGGGGMPSAPSGGGAGLDAAPTARMQDTAQKIASEKGVEPPDMTDGRAVRDFL
NKNSNADLGAYRPNAASPPSSAAQPSSTTGSAANASSADTASAAAPSSDGGAGTAEASAA
SSQTDSVPSSSGADTGPASDAGEASAAAKTDSGKAAPTPAPSTAPPPDVTVARAEARSKA
HRASRTTRAAQAAAAATSSQGGAGMTADIEHSED
NT seq 1725 nt   +upstreamnt  +downstreamnt
atgccaagccccgctaataccgacattctcaccaagtttctagatgcctattctagcgcc
attgatagcggcttcggcctcatcaatagcgatgttatgggcatcatgtcgattgtcgca
acaatcgccctcgctcttgccgcgatattttgggcgctcgacgagaatggccggattacg
tccgagctgtttaggaaagccctcttattcggtttctttctgtggttggtgaacgactgg
aaaggattgagctggaccgttgttaagggctttaccgcgttaggtttgaaggcaggcggg
agcggaatgggcgtcgatgctttccttgataagccggggaacatcgtaaagttcggattc
gatcatgtgattgcgatggggaacgtcatcaagtcgatgacggggccggtggcatttttc
gacaattttgcagcgataattatcatcgcatttgctgcgatcggaacaattgctgccttc
ttcgtcatcgctgtgcaactcgtcgtgacgctgatcgagttcaggcttgtaacgctggca
gctttcgttttgatcccgttcggcgttctaaaacagaccagctttcttactgagcgcgcg
cttggctatgtcgtgtcgtccggacttaaattaatgaccattgccctgatcgtcacgatt
ggcggcaagaccttcaataacattacccttgtcgctcccggcaatcccgaccttgccacc
acgcaggcactttcaattttgttagccgcgattcttcttatgatgctgtcacttgtcgtc
cccgcgatagcgaatgcgcttgttgcaggcgggccgcagcttggcggtggcgcagctctc
gcgggagccgctggcgttgccgccgcagcaggcggcgcatatctcgccggtcgcggcgcg
atcggcgcgggccgtgcagcgatgggcgctcctgctgccatggccgccaaggcacaagcc
gctgctggtgcgatcagagagggcgcaaaaagcggcatccctccccttggaggctttggt
agcggcacgatgggtccggcccctgggccgtcatcaggtggcggtggcggtggcggtggc
gggggtggcactccatccccgtcaggcggtggcgggatgccctccgcgccgtcaggcggc
ggcgctggcctcgacgcagccccgaccgctcgtatgcaggataccgcgcagaagatcgcc
agcgaaaagggcgtcgagccgcccgacatgaccgatggccgtgcagtgcgcgacttcctc
aacaagaacagcaatgcggacttgggggcctaccgtccgaatgccgcgtcgccgccgagc
agcgccgcgcagccgtcaagcactacaggtagtgcagccaatgcaagtagtgcggatacg
gcgagcgccgcagcaccgtccagcgatggcggagcaggcaccgccgaagcatcggcggcc
agctcgcagacagacagcgtgccgtcatcgtcaggtgccgataccggccctgcttccgat
gcgggcgaggcgagcgccgccgcgaagacggatagcggcaaagccgctcccactcctgcc
cccagcacagcgcccccgcctgacgtgacggtcgcgcgggccgaggcacgaagcaaggcg
catcgcgccagtaggaccacgcgcgccgcgcaggcggcggcggcggcaaccagtagtcag
ggcggggcaggaatgaccgccgacatcgagcacagcgaggactaa

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