Sphingobacterium sp. dk4302: GFH32_00980
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Entry
GFH32_00980 CDS
T06292
Name
(GenBank) SusC/RagA family TonB-linked outer membrane protein
KO
K21573
TonB-dependent starch-binding outer membrane protein SusC
Organism
sphe
Sphingobacterium sp. dk4302
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphe02000
]
GFH32_00980
Transporters [BR:
sphe02000
]
Other transporters
Pores ion channels [TC:
1
]
GFH32_00980
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Ortholog
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GFIT
Motif
Pfam:
Plug
CarbopepD_reg_2
TonB_dep_Rec
CarboxypepD_reg
Motif
Other DBs
NCBI-ProteinID:
QGA24982
UniProt:
A0A5Q0QBL1
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Position
225785..228748
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AA seq
987 aa
AA seq
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MVREFYNWHFRLIVIFVFSFQFVSAQQNLQLSGKVVDDMGKELAGATVSIKGTNKQVSTD
ESGNYVLEGISAGALIVEASYVGHASSEQRIQLKATQTLNFTLSSNAAEIGEVVVIGYGS
VERKHVTGAVSNVQSKDFQKGAITSPDQLIQGKVSGVSITSNGGAPGAGSTIRVRGGASL
SASNNPLIVVDGNPLSGEGISGSANPLSLINPNDIESMTVLKDANATAIYGSRASNGVIL
ITTKTGKMGRPKLNLSTVNSLSTIANQVEVLTADEVRSFVNERGTAAQKGLLGTANTDWQ
DLIYHNAITTDNNISLSGGVKNMPYRVSIGYLEQAGILKTDMLRRGTAGVNLSPRFFDNH
LKLDINFKGTMTNQEFANTGAIGSAIVFDPTQNVYDANSPYGGYFEWQEGAVPNTLSPRN
PVSLLDNYSNRAGANRSIGNAQLDYSFHFLPELHANINVGYDIASGKGATSIPDFAASNF
GNKGLFQRYRGKQNNTFIEGYLNYVKDIESINSNINVTAGYGYYDNKETNYNFSSYNAHG
DVITTPVYADNVPQNRLLSYYGRLIYSFADRYILSGTIRADGSSKFNPDGRWGIFPSAAF
TWRIKGENFLKDNNSISDLKLRVSYGETGNKDGITNYGYIPVYYYSTNEAQYQIGDQFYH
VYSPIAYDKTLRWESTATTNIGLDYGFWGGRIYGSIDAYQKKTKDLLATTEISVGTNYSN
QLLTNVGNMENRGIEGSINIQAIKSENFNWDLGFNMTVNESKITNLTLNDNPGYQLAAGW
ITGGTGNVIQYHTVGSAPFQYYVYKQVYDQQGNPLEGVYEDLNGDGAVTPADRYYYQKPA
PDYFMGFTTSINYKRLTLNTVLRASFGNYVYDNISSNFGVSRNILNPSRFINNATTDIFN
TNFNNNQYYSDYYISNASFLRMDNLGLVYNVGNLDKEGTVTMTVNANVQNVFTVSKYKGV
DPELFNGIDYTLYPRPRVYSLGLNFGF
NT seq
2964 nt
NT seq
+upstream
nt +downstream
nt
atggttagggaattttacaattggcactttcggctgatagttatcttcgtcttcagtttt
caatttgtttcggctcaacagaacttacaactttcggggaaggttgtagatgatatgggt
aaggagcttgctggagcgacggtaagtattaaaggaacaaacaaacaagtttctactgat
gagtcggggaactatgtattagaaggaataagcgcaggagcacttattgtcgaggcctcc
tatgttggtcacgcaagctctgagcagcgaattcaactaaaggctacacaaacattaaac
tttactttatcatcgaatgcggccgaaattggtgaggtggtagtcatcgggtatggttcc
gtagaacggaagcacgttacaggagccgtttccaatgtgcaatcaaaagattttcaaaaa
ggtgcaataacctctcccgaccaattaattcaaggtaaggtgtcaggtgtgtccatcact
tcgaatggaggggcgccaggtgcgggaagtactattcgtgtgcgcggaggagcttctttg
tcggcgagtaataatccattaattgttgttgatggtaatccattgagcggagagggaatt
tctggatctgcaaatcctctttcattaatcaatcctaatgatattgaatccatgaccgta
ttaaaggatgcgaatgcaaccgctatttatggatctagagcatctaatggggttattttg
attaccacaaagacggggaaaatgggaagaccaaagctaaatttgtcaacagttaactca
ttgtcaacgattgctaatcaagttgaggtgcttactgctgacgaagtaagatcttttgtt
aatgaacgcggtactgcagcacaaaaaggattattgggaactgcaaacacagattggcaa
gatttaatttatcataacgcaataaccacggacaacaatatttcgctctctggcggagta
aagaatatgccgtatcgtgtctctataggatatttagaacaggcaggtattctaaaaacg
gatatgcttagaagaggaactgctggtgtaaatctatctcctcgtttctttgataaccat
ttaaaactggacatcaatttcaaaggaacaatgacaaatcaggagtttgcaaatactggg
gcaattggttcagcgattgtattcgatcctacgcaaaacgtatatgatgcaaatagccca
tatggaggatattttgaatggcaagagggagctgttccaaatacgttatcgccaagaaat
ccagtttcattgttagataattacagtaatagagcaggagcaaatcgaagtatcggaaat
gcgcaattggattattcattccactttcttcctgaattacacgcaaatataaatgtaggt
tatgacattgcatcaggtaagggggcaacgagcattccggattttgcagcatctaacttt
ggtaataagggactatttcaacgctatcgaggtaagcaaaacaacacattcattgaaggt
tatttaaattacgttaaggatattgagagtatcaatagtaacattaacgtaacggcggga
tatggatattacgataataaggaaacgaactacaacttcagttcttataatgcccacgga
gatgtaataacaactcctgtttacgccgataatgtacctcagaatagattactttcttac
tatggtcgtttaatttactcgtttgctgatcgttatattctttccggtaccattcgtgcg
gacggctcttcgaaattcaatccagacgggcgttggggtattttcccttcagcggcattt
acgtggcgtatcaagggcgaaaacttcttgaaggataacaacagtatttctgacttgaag
cttcgtgtaagctatggagaaacgggtaataaagatgggattacgaactatggttatatt
cctgtttactattacagtacaaatgaagctcagtaccaaattggggatcaattttatcat
gtttattctccgattgcttacgataagacactacgttgggaatctacagcaacgaccaat
attggattagattatggcttctggggaggtcgtatctatggtagtattgatgcataccaa
aagaaaacgaaagatttattagcaacgaccgaaatatctgtaggtacgaattatagtaat
caattattgaccaatgttggtaatatggaaaaccgtggtattgaaggtagcatcaatatt
caagctataaaatctgagaatttcaattgggacttaggattcaatatgaccgtcaatgaa
agtaagattactaacctaactttaaacgataacccaggttatcaattagcggcaggttgg
attaccggcggtacagggaatgtgattcaataccatactgttggttcggcacctttccaa
tactatgtttacaaacaagtttatgaccaacaaggtaacccattagaaggtgtatatgaa
gacttaaatggcgatggcgctgtaactcctgccgatcgttattactatcagaaacctgct
cctgattactttatgggcttcacgacttccattaattataagcgtcttactttaaatacc
gtattgagagcaagctttggtaactatgtttatgataacatctcttcgaatttcggggtt
tcaagaaatattctaaacccgtcgcgattcattaacaatgcgactaccgatatattcaat
acgaattttaataacaatcagtattacagcgattactatataagcaacgcttctttcttg
cgcatggataacttaggattagtttataatgttgggaatctagataaagagggaaccgtg
actatgacggtcaatgcgaatgtacaaaatgtgtttacggtttctaagtacaaaggcgta
gatcctgagttgttcaatggtattgactacacattatatccaagacctagagtgtattcc
ttagggttaaactttgggttttaa
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