Sphingobacterium sp. dk4302: GFH32_04290
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Entry
GFH32_04290 CDS
T06292
Name
(GenBank) RagB/SusD family nutrient uptake outer membrane protein
KO
K21572
starch-binding outer membrane protein, SusD/RagB family
Organism
sphe
Sphingobacterium sp. dk4302
Brite
KEGG Orthology (KO) [BR:
sphe00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphe02000
]
GFH32_04290
Transporters [BR:
sphe02000
]
Other transporters
Accessory factors involved in transport [TC:
8
]
GFH32_04290
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SusD_RagB
SusD-like_3
SusD-like_2
TPR_19
DUF6531
EF-hand_7
TPR_6
TPR_2
TPR_8
Motif
Other DBs
NCBI-ProteinID:
QGA25583
UniProt:
A0A5Q0Q7Y3
LinkDB
All DBs
Position
complement(982137..983591)
Genome browser
AA seq
484 aa
AA seq
DB search
MKKKTLYKSIYAHILLLSLWGCASDKLDLYPETNLTAGNFYTSENDLTLAANDVYRQLSR
LYNSGGIPDLYGELYSDNVYIKQTTGAHSFGEDINKHSAKSDNGYITTAWNNAYNAIYIL
NNILDKLNNTSISFADPNLKTRLEAEALTTRAFYYYHLSQAFGAVPFPLKVVTPDESYDY
LREDTKVIYQQLIKDLLKAKTALPNSYTGNNIGRLTRSAASAVLAKVYIAAGNKEEAKKE
LQEIIQSGLYSLDANSDGKINIADYEYIFKASTKNSKESILEIQYLAGQNNVNSTHQTDY
APWDFAFHLPNINTTFRGNGLNTPSNNLIAEYETNDARKNLSLQLGFTNLQTNKFIDFPY
TIKFFDPDFLYPGQNVEAIRYADILLLYAELSGEATYLNQVRERAGLAPFGSSDYPNNKY
ATLSLAIEHERRIELAFEFHRFYDLVRTGRADQVLKANGINTSKLLFPIPLSAIDANPGL
TQNP
NT seq
1455 nt
NT seq
+upstream
nt +downstream
nt
atgaaaaagaaaacactatacaaaagcatttatgctcatattttattgctgtcactttgg
ggatgtgctagtgacaaattagatctatatccagagactaatttaacggctggaaatttc
tatacctcagagaacgatttaaccttagcagcaaatgatgtttatcgtcaattatctagg
ttatacaattcaggcggaatcccagacctctatggagagttatattctgacaatgtctat
atcaaacaaacaaccggtgcgcattccttcggtgaagatataaataagcacagtgcaaaa
tctgataacggctatataacaacggcttggaacaatgcgtacaatgctatttatattctc
aataatatcttagataaattaaacaacacaagcatcagctttgccgatcctaatctaaag
acgcgcttagaagcagaagcgttaaccactcgtgccttttattactatcatttaagtcaa
gcatttggcgccgttccctttccattaaaagtggtaactccggacgagagttatgattac
ctacgagaagataccaaagtcatctaccaacagctcataaaagatctacttaaggcgaag
actgcattaccaaattcctacaccggaaataacattggtcgattaacccggtctgcagca
tcggcagtacttgctaaagtctatattgcagctggaaataaagaggaagcaaagaaagaa
cttcaagagattattcaaagtggattgtattcattagacgcaaacagcgatggtaaaatc
aacatcgcagactacgaatatattttcaaagcaagcacaaagaactctaaagaatctata
ctagaaattcaatatttagcaggccaaaacaacgtcaatagtacacatcaaaccgattac
gcgccttgggacttcgcttttcatcttccgaatatcaacacgacgtttagagggaatgga
ctaaacaccccttccaataacctaattgcagaatatgaaacaaacgacgctagaaaaaac
ctttccttacaactaggattcaccaatctgcaaacgaataaattcattgatttcccttac
acaatcaaattctttgatcccgattttctctatccagggcaaaatgttgaagctattcga
tatgcagatattctactgctctatgcggaactttctggagaagcaacctaccttaatcag
gttcgggaaagagctggactcgccccttttggctcatcagactatccaaacaacaaatat
gctacgttgagtttagcaattgagcatgaacgtagaatagagctagcttttgaattccac
cgattttacgacttagtgcgaacaggaagagcagatcaggtacttaaagccaacggcatt
aacacgagcaaactgctatttccaataccgctaagtgctatagatgctaatccaggtctc
actcaaaacccttaa
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