Sphingomonas sp. FARSPH: DM480_03315
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Entry
DM480_03315 CDS
T05685
Name
(GenBank) hydrophobe/amphiphile efflux-1 family RND transporter
KO
K18138
multidrug efflux pump
Organism
sphf
Sphingomonas sp. FARSPH
Pathway
sphf01501
beta-Lactam resistance
sphf01503
Cationic antimicrobial peptide (CAMP) resistance
Brite
KEGG Orthology (KO) [BR:
sphf00001
]
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
DM480_03315
01503 Cationic antimicrobial peptide (CAMP) resistance
DM480_03315
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphf02000
]
DM480_03315
01504 Antimicrobial resistance genes [BR:
sphf01504
]
DM480_03315
Transporters [BR:
sphf02000
]
Other transporters
Electrochemical potential-driven transporters [TC:
2
]
DM480_03315
Antimicrobial resistance genes [BR:
sphf01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
DM480_03315
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ACR_tran
SecD_SecF
DUF418
Motif
Other DBs
NCBI-ProteinID:
AXJ94669
UniProt:
A0A345WLW7
LinkDB
All DBs
Position
662878..666144
Genome browser
AA seq
1088 aa
AA seq
DB search
MISRIFIDRPIFAWVLAIITMLAGVGAILSLPIAQYPDVAPPQVSIRATFPGASAQTLQN
SVTQIIEQQLTGIDGLLYFQSSSSSRGQVTITATFQKGTDPDIAQVQVQNQVQQGVSRLP
QQVQQQGLVVRKSNPDNLLIVGVYDETDKRSNIDVADYLVSNLQDPLGRVPGVGDVNVYG
SQYAMRIWLNPAKLASVQLIPADVVTAIQSQNTEVAAGEVGGLPSGPDQMLDATVTAQSR
LQTPEQFRQIILKTLPSGATVRLSDVARIELGAESYASVSRINRHPGAGIAVLLAPGADA
LKTAELVKAEVARVAKGFPAGLKVAYANDTTAFIKLSIEEVVKTLIEAIILVVIVMFVFL
QSWRATLVPGIAVPVVLLGTFAIFHVAGFSINTMTLFGLVLAIGLLVDDAIVVVENVERL
MEENPDMTPREATIESMSEISVALIAIALVLSAVFLPMAFFGGSTGVIYRQFSLTIVSAM
VLSVLVALILSPALTASLLKQRSKEAEEAQGFKRRFPRVAGWGTKASDWFNRTFDRGVQR
YTAAVQTVIDRKWMFLLIYLGVVALLAVLFLRLSTGFLPTEDQGAASIQFQLPAGATQAR
TLQVQRQVESYFTHYEPKNTAVLFTVAGGGGGGASGQNTGQGFLNFVDWKDRKGSENTAD
TITTRASAAFRALRDARVFVLVPPAIRGLGSTDGFTMELQNTGGLTQEQFNAARDKLLGM
ANADPKLASVRLTELPDIATLRIDADAQKLAALGLTQANVNSTLTTAWGGQYVNDFIDRG
RVKRVYVQGDAPYRSSPEDLKQWFVRGSNGQMAPFSSFSKTGWSTAPTTLSRFNGISSFE
FSGSGAKGVSSGDAMTRISQLAAQIPGTSIAWSGLSYQERLSSGQAPLLYGLSILVVFLC
LAALYESWSIPFAVLLVIPLGLIGAIAFVTLRGLTNDVYLQIGLLTTMGLAAKNAILMIE
FAEQAERKGARVIDAALEAAKIRLRPILMTSFAFIFGVLPLAVSTGAGANSRIAIGTAVI
GGMLTATVLAIFYIPLFFVLVRRGVRDGLARLRGKPVGHHGGHDGDDGNPPAPPMPPATT
PPHAPEPA
NT seq
3267 nt
NT seq
+upstream
nt +downstream
nt
atgatcagccgcatcttcatcgaccgccccatctttgcatgggtgctggcgatcatcacc
atgcttgccggcgtcggcgcgatcctgtcgctgccgatcgcgcaatatcccgacgtcgcg
ccgccgcaggtatcgatccgcgcgaccttccccggggcatcggcgcagacgctgcagaat
tcggtgacgcagatcatcgagcagcagctgacgggcatcgacggcctgctctatttccag
tcctcctcgtccagccgcgggcaggtgacgatcaccgcgacgttccagaagggcaccgat
cccgacatcgcgcaggtccaggtgcaaaaccaggtgcagcagggcgtctcgcgcctgccg
caacaggtgcagcaacagggcctcgtcgtccgcaagtcgaaccccgacaacctgctgatc
gtcggcgtctatgacgagaccgacaagcgctccaatatcgacgtcgccgactatctggta
tccaatctgcaggacccgctcggccgggtgcccggggttggcgacgtcaacgtctatggc
tcgcaatatgcgatgcgcatctggctgaaccccgcaaagctggcgagcgtccagctgatc
cctgccgatgtggtcaccgcgatccagagccagaacaccgaggtcgcggcgggcgaggtc
ggcggcctgccgtccggccccgaccagatgctcgacgccaccgtcaccgcgcaatcgcgg
ctccagacgcccgagcagttccggcagatcatcctcaagacgctgccgtcgggcgccacc
gtgcggctgtcggacgtcgcccggatcgagctcggcgcggaaagctatgcctccgtcagc
cgcatcaatcgccatccgggcgccggcatcgccgtgctgctcgcgccgggcgccgacgcg
ctcaagaccgccgagctggtgaaggccgaggtcgcgcgcgtggcaaagggattcccggcc
ggcctcaaagtcgcctacgccaacgacaccaccgcgttcatcaaactgtcgatcgaagag
gtggtcaagacgctgatcgaggcgatcatcctcgtcgtcatcgtgatgttcgtcttcctg
caaagttggcgcgcgacgctggtgcccgggatcgcggtgcccgtggtgctgctcggcacg
ttcgcgatcttccacgtcgccggcttctcgatcaacacgatgacgctgttcgggctggtg
ctcgccatcggtctgctcgtcgacgatgccatcgtcgtggttgagaacgtcgagcggttg
atggaagagaatccggacatgacgccgcgcgaggcgacgatcgagtcgatgagcgagatc
agcgtcgcgctgatcgcgatcgcgctcgtcctgtccgcggtgttcctgccgatggcgttc
ttcggtggatcgacgggcgtcatctatcgccagttctcgctgacgatcgtgtcggcgatg
gtgctgtcggtgctcgtcgcgctgatcctgtcgcccgcgctcaccgcctcgcttctcaag
cagaggtcgaaggaagccgaagaggcgcaagggttcaagcgccgcttcccgcgcgtcgcc
ggctggggaacgaaggcgtccgactggttcaaccgcaccttcgaccgcggcgtgcaacgc
tataccgccgccgtgcagacggtaatcgaccgcaagtggatgtttctcctgatctacctc
ggcgtcgtcgccctgctcgcggtgctgttcctacggctgtcgacgggctttctgccgacc
gaggatcagggcgccgcgagcattcagttccagctgcctgccggtgccacgcaggcgcgc
accctgcaggtccagcgccaggtcgaaagttatttcacgcattacgagcccaagaacacg
gccgtgctcttcacggttgcgggcggcggcggcggcggcgcgtccggccagaatactggg
cagggcttcctcaatttcgtcgactggaaagaccgcaagggcagcgagaacaccgccgat
accatcaccacccgtgcgtccgcggccttccgggccctgcgcgatgcacgcgtgttcgtg
ctcgtgccgccggcgatccgcggtctcgggtccaccgacggcttcaccatggagcttcag
aacaccggcggcctgacgcaagagcagttcaacgcagcgcgcgacaagttgctcggcatg
gcgaatgccgatccgaagctcgcgtcggtccgcctcaccgagcttcccgacatcgcgacc
ctgcgcatcgatgccgacgcacagaagctcgccgcgctgggcctcacgcaggccaacgtc
aattccacgctcaccaccgcctggggtgggcagtatgtcaacgacttcatcgaccgcggc
cgcgtgaagcgcgtctacgtacagggcgatgcgccatatcgctcttcgcccgaagacctg
aagcagtggttcgtacgcgggtcgaacggccagatggcgcccttttcgtccttttccaaa
acgggctggtcgaccgcgcccaccacgctgtcgcgcttcaacggcatttcctcgttcgaa
ttttcgggatccggcgcgaagggcgtcagttcgggcgatgcgatgacgcggatcagccag
ctcgccgcgcaaatccccggcacctcgattgcctggtccggcctcagctatcaggagcgg
ctgtcctcgggccaggcgccgctgctctacgggctgtccatcctcgtcgtgttcctgtgc
ctggccgccttgtacgaaagctggtcgatcccgttcgcggtgctgctcgtcatcccgctc
ggcctgatcggcgcgatcgcgttcgtgaccctgcgcggccttactaacgacgtctatctc
cagatcggcctgctgacgacgatgggtctcgccgcgaagaacgcgatcctgatgatcgaa
ttcgccgaacaggcggaacgcaagggcgcgcgcgtcatcgacgcggcgctggaggcggcg
aaaatccgtctccggccgatcctgatgaccagtttcgcgttcatctttggcgtgctgccg
ttagccgtctcgacgggcgcgggcgcgaacagccgcattgcgatcggtaccgccgtcatc
ggcggcatgctgaccgcgacggtgctcgccatcttctatatcccgctgttcttcgtgctc
gtgcgtcgcggcgtgcgcgacggcctcgcccggctgcgcggcaagccggtcgggcaccat
ggcggccatgatggcgacgacggcaatccgcccgcgcccccgatgccgcccgccaccacc
ccgccccatgcgccggagcctgcctga
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