Sphingorhabdus sp. M41: AZE99_11170
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Entry
AZE99_11170 CDS
T04317
Name
(GenBank) ATP-dependent DNA helicase RecQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
AZE99_11170
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphg03019
]
AZE99_11170
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_11170
Enzymes [BR:
sphg01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AZE99_11170
Messenger RNA biogenesis [BR:
sphg03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
AZE99_11170
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
AZE99_11170
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
RQC
HRDC
Helicase_C
RecQ_Zn_bind
ResIII
AAA_22
SecA_DEAD
Motif
Other DBs
NCBI-ProteinID:
AMO72338
UniProt:
A0A127MGR5
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All DBs
Position
2364374..2366152
Genome browser
AA seq
592 aa
AA seq
DB search
MTEALLPLLKSTFGYSSFRGMQDQVMERVMAKQNTLAVMPTGSGKSLCYQLPAIANEGTT
IVISPLIALMHDQLRSAEAVGIRAATLTSADDNRAETIARLKAGELDLLYAAPERASQSH
FRELLEQTDISLFAIDEAHCVSEWGHDFRPDYRLLRPLLDHFASVPRLALTATADAHTRD
DILVQLGIEQDGLILAGFDRPNIRYSMSPRSGLARQIGDLVERVPGPGIVYAQTRAATEK
MASQIAATGRSARAYHAGLPPEVRQQNQHDFVASEDMVMVATIAFGMGIDKPDVRFVAHA
GLPKSIEAYYQETGRAGRDGDPAEAHMFWGAEDFAKARQRLGEIDETRLESERTRLAALG
GLVETPGCRRAVLLRHFGENPPAQCGNCDNCLNAPDTRNVTELARKFLSAVYRTGQSFGV
THLEAVLTGKQDEKILSRGHDQLSVFDIVGEEEAQLIKPVSRSLLLRDALRNTEHGGLMF
GPEARKILKGEQEIAIVEPPKRTSRKRRGSSASPNPFGDPLFEALRKKRMELAKELGVPP
YVIFHDSVLRDMTGLKPNSLTALSELPGIGAAKLEKHGEAFLAVIRDVTEAA
NT seq
1779 nt
NT seq
+upstream
nt +downstream
nt
atgaccgaagccctccttcccctgctcaaatcgaccttcggctacagcagctttcgcggc
atgcaggatcaggtgatggagcgggtgatggcgaagcaaaatacgctggccgtgatgccg
accggttccggcaaatcgctctgctaccagttgcccgccatagccaatgaaggcacgacc
atcgtgatatctccgctgatcgcgctgatgcacgaccagttgcgcagcgccgaagcggtg
gggatcagggcggccaccctcacttccgctgacgacaatcgcgccgagacaattgcccgt
ctgaaggccggtgaactggacctgctctacgccgcgccggaacgcgcgtcgcagtcgcat
ttccgcgaattgctcgagcagaccgatatttcgctcttcgccattgatgaagcgcattgc
gtttccgaatggggccatgatttccggcccgactaccgtttgctccgcccccttctcgac
cattttgcttcggtgccacggctggcgctgaccgccacggccgacgcgcatacacgcgac
gacatactggtgcagctgggaatcgagcaagacggtctgatcctcgccggctttgaccgg
cccaatatccgctacagcatgagcccgcgcagcggcttggcacggcagatcggggacttg
gtcgagcgcgttccgggaccaggcatcgtctatgcccagaccagggcagcaaccgaaaaa
atggccagccagatcgctgccaccggacgcagcgcccgtgcctatcatgcgggtctgccg
ccggaagtccgccagcagaaccagcatgatttcgtcgcctccgaagatatggtgatggtc
gcgaccattgccttcggcatgggcatcgacaagccggatgtgcgctttgtcgcccatgcc
ggactgcccaagtcgattgaggcttattatcaggaaaccggtcgcgccggccgcgacggc
gatccggccgaggcccatatgttctggggcgcggaggatttcgcaaaagcgcggcagcgg
ctgggagaaatcgacgagacccggctggaaagcgagcggacaaggctggcggcgctcggc
ggactggtggaaactccgggttgccgccgtgccgtgctgcttcgtcacttcggcgagaac
ccgccggcgcaatgcggcaattgcgacaattgcctgaacgccccggacacccgaaatgtc
accgaactggcgcgcaaattcctgtccgccgtctatcgcactggccagagtttcggcgtc
acccatctcgaggcggtactcactggaaaacaggatgaaaaaatcctctcgcgcggtcat
gaccagctttcggttttcgacattgttggggaagaagaagcacagctgatcaagccggta
tcccgctcacttttgctccgcgatgcgctacgcaataccgaacatggcggcttgatgttc
ggccccgaggcgcgcaagattctaaagggcgaacaggaaatcgccattgtcgaaccgccc
aagcggacatcacgcaaaaggcgcggcagcagcgcgtctcccaatccgtttggcgatcct
ttgttcgaggcgttgcgcaagaaacggatggaactggccaaggaactgggcgtcccgcct
tatgtgatctttcacgacagcgtcctgcgtgatatgaccggcctgaagccgaacagcctg
acagcgctcagcgaactacccggtatcggcgcggcgaaactcgagaaacatggcgaagcc
tttctggcagtcattcgcgatgtgaccgaagcagcgtag
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