Sphingorhabdus sp. M41: AZE99_11400
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Entry
AZE99_11400 CDS
T04317
Name
(GenBank) exodeoxyribonuclease III
KO
K01142
exodeoxyribonuclease III [EC:
3.1.11.2
]
Organism
sphg
Sphingorhabdus sp. M41
Pathway
sphg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
sphg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
AZE99_11400
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphg03400
]
AZE99_11400
Enzymes [BR:
sphg01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.2 exodeoxyribonuclease III
AZE99_11400
DNA repair and recombination proteins [BR:
sphg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
AP endonucleases
AZE99_11400
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Exo_endo_phos
Exo_endo_phos_2
Motif
Other DBs
NCBI-ProteinID:
AMO73402
UniProt:
A0A127MJG0
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All DBs
Position
2415708..2416502
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AA seq
264 aa
AA seq
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MSDSLKIVSWNINSIRARLDIVERFLTEEAPDVLCLQETKVRNEQFPEGMFRRLGYNHMI
LHGQPMHHGVAIISRVPLHKDERFDWQNNGEARHVGAVLQNGIRIENVYIPAGGEIADRE
LNPKFGQKLDFFGRMTEWSQNLKEPTILMGDFNVAPLESDVWSHKALVKVVSHTQIEIDH
LYKMRDAHGWVDVGRKLIPDPERLFTWWSYRAKDWRASDKGRRLDHVWVSPELGDKAVSH
SVLEDARSWGKPSDHAPLITEFEF
NT seq
795 nt
NT seq
+upstream
nt +downstream
nt
atgagtgatagtctgaaaatcgtcagctggaatattaacagcatccgtgcccgcctcgac
attgttgagcgtttcctgacagaggaagcacccgatgtcctgtgtctgcaggaaaccaaa
gtgcgcaacgaacaatttcccgaagggatgttccggcgcctcggctataatcacatgata
ttgcacggtcagccgatgcaccacggcgtcgcgatcatcagccgcgtgccgctgcacaag
gatgaacggtttgactggcagaataatggcgaagcccgccatgtcggtgcggtgctgcaa
aatggcatcagaatcgagaatgtctatattcccgctggcggcgagattgctgaccgtgaa
ctcaatccgaaattcgggcagaagctcgatttcttcggccggatgaccgaatggtcgcaa
aatctgaaagagccgacgatcctgatgggcgacttcaatgtcgcgccactggaatccgat
gtctggagccacaaggcgctggtcaaggttgtcagccacacccagatcgagatcgaccat
ctctacaagatgcgcgacgcgcatggctgggtcgatgtcggccgcaagctgatccccgat
cccgagcgcctcttcacctggtggagctatcgcgccaaggactggcgcgcctcggacaag
ggccggcggctcgaccatgtctgggtcagcccggagctgggagacaaggcggtcagccat
tcggtccttgaagacgcgcgcagctggggcaagccatcggatcacgcgccactgatcacg
gaattcgaattttga
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