KEGG   Sphingorhabdus sp. M41: AZE99_11400
Entry
AZE99_11400       CDS       T04317                                 
Name
(GenBank) exodeoxyribonuclease III
  KO
K01142  exodeoxyribonuclease III [EC:3.1.11.2]
Organism
sphg  Sphingorhabdus sp. M41
Pathway
sphg03410  Base excision repair
Brite
KEGG Orthology (KO) [BR:sphg00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03410 Base excision repair
    AZE99_11400
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphg03400]
    AZE99_11400
Enzymes [BR:sphg01000]
 3. Hydrolases
  3.1  Acting on ester bonds
   3.1.11  Exodeoxyribonucleases producing 5'-phosphomonoesters
    3.1.11.2  exodeoxyribonuclease III
     AZE99_11400
DNA repair and recombination proteins [BR:sphg03400]
 Prokaryotic type
  SSBR (single strand breaks repair)
   BER (base exicision repair)
    AP endonucleases
     AZE99_11400
SSDB
Motif
Pfam: Exo_endo_phos Exo_endo_phos_2
Other DBs
NCBI-ProteinID: AMO73402
UniProt: A0A127MJG0
LinkDB
Position
2415708..2416502
AA seq 264 aa
MSDSLKIVSWNINSIRARLDIVERFLTEEAPDVLCLQETKVRNEQFPEGMFRRLGYNHMI
LHGQPMHHGVAIISRVPLHKDERFDWQNNGEARHVGAVLQNGIRIENVYIPAGGEIADRE
LNPKFGQKLDFFGRMTEWSQNLKEPTILMGDFNVAPLESDVWSHKALVKVVSHTQIEIDH
LYKMRDAHGWVDVGRKLIPDPERLFTWWSYRAKDWRASDKGRRLDHVWVSPELGDKAVSH
SVLEDARSWGKPSDHAPLITEFEF
NT seq 795 nt   +upstreamnt  +downstreamnt
atgagtgatagtctgaaaatcgtcagctggaatattaacagcatccgtgcccgcctcgac
attgttgagcgtttcctgacagaggaagcacccgatgtcctgtgtctgcaggaaaccaaa
gtgcgcaacgaacaatttcccgaagggatgttccggcgcctcggctataatcacatgata
ttgcacggtcagccgatgcaccacggcgtcgcgatcatcagccgcgtgccgctgcacaag
gatgaacggtttgactggcagaataatggcgaagcccgccatgtcggtgcggtgctgcaa
aatggcatcagaatcgagaatgtctatattcccgctggcggcgagattgctgaccgtgaa
ctcaatccgaaattcgggcagaagctcgatttcttcggccggatgaccgaatggtcgcaa
aatctgaaagagccgacgatcctgatgggcgacttcaatgtcgcgccactggaatccgat
gtctggagccacaaggcgctggtcaaggttgtcagccacacccagatcgagatcgaccat
ctctacaagatgcgcgacgcgcatggctgggtcgatgtcggccgcaagctgatccccgat
cccgagcgcctcttcacctggtggagctatcgcgccaaggactggcgcgcctcggacaag
ggccggcggctcgaccatgtctgggtcagcccggagctgggagacaaggcggtcagccat
tcggtccttgaagacgcgcgcagctggggcaagccatcggatcacgcgccactgatcacg
gaattcgaattttga

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