Tardibacter chloracetimidivorans: BSL82_01465
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Entry
BSL82_01465 CDS
T04967
Name
(GenBank) DNA helicase II
KO
K03657
ATP-dependent DNA helicase UvrD/PcrA [EC:
5.6.2.4
]
Organism
sphj
Tardibacter chloracetimidivorans
Pathway
sphj03420
Nucleotide excision repair
sphj03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
sphj00001
]
09120 Genetic Information Processing
09124 Replication and repair
03420 Nucleotide excision repair
BSL82_01465
03430 Mismatch repair
BSL82_01465
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphj03400
]
BSL82_01465
Enzymes [BR:
sphj01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
BSL82_01465
DNA repair and recombination proteins [BR:
sphj03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
GGR (global genome repair) factors
BSL82_01465
MMR (mismatch excision repair)
Other MMR factors
BSL82_01465
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
UvrD_C
AAA_19
UvrD_C_2
AAA_30
Viral_helicase1
PcrA_UvrD_tudor
AAA_12
AAA_11
Motif
Other DBs
NCBI-ProteinID:
API58131
UniProt:
A0A1L3ZR78
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Position
complement(269597..271876)
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AA seq
759 aa
AA seq
DB search
MNQPLPLSSQSDPYLKGLNAPQRQAVLTTEGPVLMLAGAGTGKTAALTARLAHLIASRRA
WPSEVLAVTFTNKAAREMRHRVERMIGDAVEGMPWLGTFHSVAARMLRSHAELVGLKPNF
SILDTDDQLRLLKQIINAANIDEKRWPARLLAGLIDKWKNRGWTPADLSLDESHAYADGR
GQEMYRAYQDRLKTLNAADFGDLLLHMLVIFRTHREVLEGYQARFKYLMVDEYQDTNTSQ
YLWLRLLAQTRKNICVVGDDDQSIYSWRGAEVANILRFEKDFPGATVIRLEQNYRSTPHI
LGAASGMIANNGGRLGKTLWTEREAGEKVRVMGVWDGPEEARFVGERIEAHIAGGGRAED
CAILVRAQFQTREFEDRFISIGLPYRIVGGFRFYERAEIRDALAYLRVVAQPDDDLAFER
IINTPKRGLGDKAVQKVHALARATGTGLLTAAARIVDSDELTPQARRSLGNLVADLARWR
SNADTLPHPDLARLLLEESGYVAMLQADRSAEATGRLENLNEFARAMEEFENLSAFLDHV
ALVMDNDADDSASKVTILTIHAAKGLEFDTVFLAGWEEGVFPSQRSLDEGGNASLEEERR
LAYVAITRARRQAWIMHAANRRIYGQWTSSIPSRFIAELPAEHVEVETSMSGGASLWRSQ
FSEQPDPFAHAGRGAGRGPGWQRASGGGFNRASGTRIIEAKASAVSLGSKGRDDVAVGDR
VFHAKFGYGHIALIEGNKLEIDFDHSGRKRVLDSFIEKA
NT seq
2280 nt
NT seq
+upstream
nt +downstream
nt
gtgaatcagccccttcccctctcctcgcaaagcgatccctatctgaagggcctcaacgcg
ccgcagcggcaggcggtgctcaccaccgaaggcccggtgctgatgctggcgggcgcgggc
acgggcaagacggccgccctcaccgcccggctggcgcatctcatcgcgtcgcgccgcgca
tggccgtctgaagtccttgcggtcaccttcaccaacaaggcggcgcgcgaaatgcggcac
cgggtggaacggatgatcggcgacgccgtggaaggcatgccgtggctcggcacgttccac
tccgtcgcggcgcgaatgctccgcagccatgccgagttggtcgggctgaagcccaatttc
tcgatcctcgacaccgacgaccagcttcgtctcctgaagcagatcatcaacgccgccaat
atcgacgagaagcgctggcccgcgcggttgctggcgggtctgatcgacaagtggaagaac
cgcggctggacgcccgccgatctttcgctcgatgaaagccatgcctatgccgatggccgt
gggcaggaaatgtacagggcctatcaggaccggctcaagacgctgaacgcagccgacttc
ggcgatctcctgctccacatgctcgtcattttccgcacacatcgggaggtgctggagggg
tatcaggcgcgcttcaaatatctgatggtggacgaatatcaggacaccaacaccagccaa
tatctttggctgaggctgcttgcgcaaacgcgcaagaacatctgcgtcgtgggcgacgac
gaccagtccatctattcatggcgtggcgcagaagtggccaacatcctgcggtttgaaaag
gattttccgggcgcaaccgtaatccggctggagcagaactaccgctcgacgccgcacatt
ctcggtgcggccagcggcatgattgcgaacaatggcggccggctcggcaagaccctgtgg
accgagcgagaggccggcgaaaaagtccgcgtcatgggcgtgtgggacggtccggaagag
gcccgcttcgtcggcgaacggatcgaggcgcatatcgccggcggcggccgggcggaggat
tgcgcgatcctggtccgcgcccagttccagacccgcgagttcgaggaccgcttcatttcc
atcggcctgccctaccggatcgtgggcggtttccgcttctatgagcgggccgaaatccgc
gatgcgctggcctatctgcgggtcgtcgcccagccggacgatgatctcgcgttcgagcgc
atcatcaacacgccgaagcgtgggcttggcgacaaggcggtgcaaaaggtccatgcgctt
gcccgcgccaccggcacggggctgctgacggccgccgcacggatcgtcgacagcgacgaa
ctgacgccgcaggcgcggcgttcgcttggcaatctggtcgcggatctcgcgcgctggagg
tcgaacgcggacacccttccccaccccgacctcgcccggctgctgctggaggagtcggga
tatgtcgccatgcttcaggccgatcgttcggcggaagccacggggcgtctggaaaatctg
aacgaattcgcccgcgcgatggaagagttcgagaatctttccgcctttctcgatcatgtg
gcgctggtgatggacaatgacgccgacgacagcgcgtcgaaggtgacgatcctcaccatc
catgcggccaaagggcttgagttcgacaccgtgttcctcgcgggatgggaggaaggcgtc
tttccctcgcagcgctcgctcgacgaaggcgggaacgccagcctggaggaggagcgccgc
ctcgcctatgtcgcgatcacgcgggcgcggcgtcaggcgtggatcatgcacgcagcaaac
cgccggatatacggccaatggacatcgtctattccctcgcgcttcattgcggagcttccg
gcggagcatgtcgaggtcgaaaccagcatgtcgggcggcgcttcgctatggcgctcgcag
ttttccgagcagccggaccccttcgcccatgcaggtcgcggcgcggggcgcgggccgggt
tggcaacgggcgagcggcggcggcttcaaccgcgcatccggaacccggatcatcgaggca
aaggcgagcgccgtcagccttggatcgaaggggcgcgacgatgtcgcggtgggcgaccgc
gttttccacgccaaattcggttacggccatatcgcactgatagaaggcaataaactggag
atcgatttcgaccatagcggccgcaagcgggtgctcgacagcttcatcgaaaaggcctga
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