Sphingopyxis fribergensis: SKP52_01520
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Entry
SKP52_01520 CDS
T03542
Name
(GenBank) putative methylase/helicase
KO
K26273
protein strawberry notch
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
sphk03036
]
SKP52_01520
Chromosome and associated proteins [BR:
sphk03036
]
Eukaryotic type
Chromatin remodeling factors
Other chromatin remodeling factors
SKP52_01520
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AAA_34
Helicase_C_4
ResIII
Motif
Other DBs
NCBI-ProteinID:
AJA07241
UniProt:
A0A0A7PAY7
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All DBs
Position
339040..343266
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AA seq
1408 aa
AA seq
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MSVPLLALAHPDEPESFKTTRLFDVATRLSDLLRRGQPIRRQDLKRLMEEAFSASDATGN
WSMRDAYDALEAAQVILLKSPGGRTGIVPDGADAFASLRRLERALPTQTYRSEHQVEMQQ
FSTPISLAWLAAQAARIGKDDQVLEPSAGTGMLAAHAVRLGAALTLNERDPGRAALLGKL
LGDPVTTHDAEFINDLLLPGISPSVVLMNPPFSRSDGRGKDRFAGARHLRSALLRLAPGG
RCVAIMPPSFAADGAAANGYTMVCETANPRVEITILGNPYAKHGTSIAVRLIIFDKGWTG
PAERLTAQTIEEAAALVGGVPPRLSVPEPEPPAPAVIPLRPRASAKPSPSTIFGGMQKRV
LVVPDRIAADGSASPVDYTIRATPLPAGDPVGHYAPWRPARIEINGARPHPDQLVESVAM
ASVLPPAPSYRPMFQPQALAALSDAQLETIIHAGEACERDLKGTFSPNKAGDQLHEDAEG
AVYRTGFFIADGTGVGKGREGAGIILDQWNRGRRRAIWISRSSALIEDARRDWSALGGVP
IDIQPLDAFPLGEPVAMASGIVFLTYATLRSQRHDRASRLQQLLDWAGPDFDGVILLDES
HALGNAAGTETEFGAAKGSEQGLAGVRLQIALPRARVIYVSATGATKPENLSYTARLGLW
GPGTAFRDRDAFLAAMEEGGIAAMEIVARDTKAMGLYTARALSFASVEYDPLEHKLTSAQ
IEIYDAYADAWAVIHRNVDAALKAANIVDRASGRTLNAMAKGSALSRFESSKQRFWSALL
ISMKMPTVFEAIETEIAAGNVAVVQLVSTAEAILDRRLAELSPEERAHLDLELSPRATMI
DYLKNAFPTQQMRVFATSDGSLRSEPMRHETGNMVECAEAIAARDALIEELCAMPPVPAA
LDALLAHFGTAQVAEVTGRSRRIVIGSDGSQKLERRGARANLSETQAFMDGLKPILVFSD
AGGTGRSYHADLTCRTADKRRVHFLLEPGWRADVAIQGLGRTHRTNQSMPPVFRPVTTDC
KGERRFISTIARRLDSLGALTRGQRQTGGQNLFDPADNLESDYAREALTQWYHLLHGNKL
SSVNMESFQAITGLKLRDEDGTLLEKLPPIQRWLNRILALRIATQNAIFDEYMGLIQARI
DAALEAGTLDVGVETIRAEQIITRSEQTLRTDPVTGAETRLLRLELHLRPRVMHWNRLMQ
IWDGTREIAYLWNGRSKRVALKVPSWSITDEEGRIVPMCQLVRPTGGTRMQEIAMWASLW
KEIDRDEFQKLWEAEASEAEAKVDIETVNVATGLLLPVWHRLPQDDVRVWRIDDGQGISI
IGRLIPPAAMAELQSAFGLDGTVELTAAELGAAAQKGTGVAIPGLGGATLTTALVNGSRR
LEIRNYRPEDRERLKVHGVFSEVIQHLD
NT seq
4227 nt
NT seq
+upstream
nt +downstream
nt
atgtctgttcctttgctcgcgctcgcacatcccgacgagcctgaatctttcaagaccacg
cgtcttttcgacgtcgctacccggttgtctgacctgctccgacgcggccagcccattcgc
cgccaggacctcaagcgtctgatggaggaagccttctcggcctccgacgcgacgggcaac
tggtcgatgcgcgacgcctatgatgcgctcgaggctgcacaggtcatcctcctcaaatca
cctggaggccggactggcatcgttccggacggagctgatgcattcgcctcgcttcgccgc
ctcgaacgggcgctccccacccagacctatcgcagcgaacatcaagtcgagatgcagcag
ttcagtacgccgatctcgctcgcctggctcgccgcgcaggccgcgcgtatcggcaaggac
gaccaagtgctcgaaccctctgccggcaccggcatgctggcagctcacgcggttcggctc
ggtgccgcgctgaccctgaacgagcgcgatcccggccgcgccgcgctgctcggaaaactg
ctcggcgatcctgtcacaacgcacgacgccgaattcatcaacgacctgctactccccggc
atctccccaagcgtcgtgctgatgaacccacccttcagccggagcgacggtcggggcaag
gaccgcttcgccggcgcccgtcatctgcgttccgcgctgctgcggctggcaccgggcggc
cgctgtgtcgctatcatgccacccagcttcgcagcggacggtgcagcggccaacggctat
acgatggtgtgcgagaccgcgaacccgcgtgtcgaaatcacgatcctcggcaacccctat
gccaagcatggcaccagcatcgcggtccgactgatcatattcgacaaaggttggacaggg
ccggcggaacgcttgaccgcccaaacgattgaggaagccgcggcgctggtcggaggcgtc
ccgccgcgcctttccgtacccgagccggagccaccagcgccggccgtcatccccctgcga
ccgcgcgcctccgccaaaccatcaccgtcgacgatcttcggcggcatgcagaagcgcgtg
ctggttgtccccgaccgcatagcggccgatggaagtgccagtccggtcgactatacgatc
cgcgcaacgccgctgccagcgggcgatccggtcggacattacgcgccctggcggcccgca
cgcatcgaaattaacggcgcaaggccccacccggaccaattggtggagtcggttgccatg
gcatccgtgctgccgcccgcgcccagctatcgtccgatgttccagccgcaggctctcgcc
gccctgtctgacgcccagctggaaacgatcatccatgccggcgaagcctgtgagcgcgat
ctgaaaggcaccttctcgcccaacaaggcgggcgaccaattgcacgaggatgcggaaggc
gctgtttaccggacgggcttcttcatcgctgacggcaccggtgtgggcaaaggccgtgag
ggtgcgggcatcatcctggaccaatggaaccgcggccgccgccgggcaatctggatttca
cgcagctcggcgttgatcgaggacgcaaggcgggactggagcgcgctcgggggcgtcccc
atcgatatccagccactcgatgcgtttccactcggtgaaccggtcgctatggctagcggg
atcgtcttcctcacttatgcgacgctccgctctcagcggcatgaccgcgcatcgcgtctg
caacaattgctcgattgggcggggccagacttcgacggcgtcatcctgctcgacgagtcg
catgcactcgggaacgctgccggcaccgagaccgagtttggcgcggctaaggggtccgaa
cagggccttgctggcgtccggctgcagatcgcgttgccgcgcgcccgggtcatctatgtt
tccgcgaccggagcgaccaaaccggaaaatctgagctataccgcacggctcggcctctgg
ggaccgggtactgccttccgagaccgagacgctttccttgccgcgatggaggagggcggc
attgcggcgatggagatcgtcgcgcgcgataccaaggccatggggctctatacggcacgc
gcgctcagcttcgccagcgtcgaatatgacccgctcgagcataagctgacatccgcccag
atcgaaatctacgatgcttatgccgacgcctgggccgtgattcatcgcaacgtcgatgcc
gcgttgaaagccgccaatatcgtcgatcgcgcctcaggtcggaccttgaacgcgatggcg
aagggatccgcgctcagccgattcgaaagctccaagcagcgcttctggtcggcattgctc
atctcgatgaagatgccgaccgtcttcgaggcgatcgaaaccgaaatcgcagcgggcaat
gtagctgtcgtccaactcgtcagcaccgccgaggcaattctcgacaggcggcttgcggaa
ctctcgccagaagaacgcgcgcatctcgatctggaactctcgccgcgggcgaccatgatc
gattatctcaaaaacgccttcccgacccagcagatgcgcgttttcgccaccagcgatggt
tcactccggtcagagccgatgcgccacgagacgggcaatatggtcgaatgcgccgaagcc
attgcggctcgcgacgcattgatcgaggagctctgcgccatgccgccggttccggctgct
ctcgacgcgctgctcgcgcatttcgggacggcacaagtcgccgaggtaacgggccgatcg
cgtcgcatcgtaatcggcagcgacggttcccagaagcttgaacggcgcggcgcacgcgcc
aatctctccgaaacccaggcattcatggacgggctgaaacccatccttgtcttctccgac
gccggtggcaccggtcgttcctatcatgccgacctgacctgcaggacggccgacaagcga
cgcgtccatttcctgctggaaccgggctggcgtgcggatgtcgcgatccagggtctgggg
cgcacccatcgcaccaatcagagcatgccgcctgtgttcaggccggtgacgaccgactgc
aagggcgagcgtcgcttcatctcgaccatagcgcgccgtctcgacagtctgggcgcgctg
acacgcgggcagcgccagacgggtggccagaacctgttcgatccggcggataatctcgaa
agcgattacgcacgggaagcgctaacccaatggtatcatcttctccatgggaacaagctc
tcgagtgtgaatatggagagcttccaggccatcaccggtctcaagcttagagacgaggac
ggcacgctcctcgagaagctgccgccgatccagcgctggctcaaccgcatcctcgcgctc
cggatcgcaacccagaatgcgattttcgacgaatatatggggctcatccaggcgcgcatc
gacgcggcgcttgaagccggtacgcttgatgtcggagttgagaccatccgcgccgagcag
atcatcacgcgatccgagcagacgctgcgcaccgatccggtgaccggcgcggagaccaga
ctgctacgactcgagctccatctgcgcccgcgcgtcatgcactggaaccggttgatgcag
atctgggacggcacccgcgaaatcgcttatctctggaacggcaggtccaagcgcgtcgct
ctaaaagtgccgtcctggtcgattaccgacgaggaaggacgcatcgtgcccatgtgtcag
cttgttcgtccgaccggcgggacccgcatgcaggaaatagccatgtgggccagcctctgg
aaagagatcgaccgtgacgaattccagaagctctgggaagccgaagcgagcgaggcggag
gccaaggtcgatatcgagaccgtcaacgtcgcgaccggactcctcctgccggtttggcac
cgacttcctcaggatgatgtccgcgtctggcggatcgatgatgggcaggggatttcgatc
ataggccgcctgatcccgccggcggcaatggcggaactgcaatcagccttcggtctcgac
ggcacggtcgaactgaccgctgccgaacttggcgccgcggcccagaaggggacgggggtt
gcgatcccaggcctgggcggcgcgacgttgacaaccgcgctcgttaacggctcgcgccga
cttgaaatccgcaactaccggccggaggaccgcgagcgactgaaggtccacggtgtgttc
agcgaggtcattcagcacttagattag
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