Sphingopyxis fribergensis: SKP52_05795
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Entry
SKP52_05795 CDS
T03542
Name
(GenBank) carbohydrate-selective porin OprB
KO
K07267
porin
Organism
sphk
Sphingopyxis fribergensis
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphk02000
]
SKP52_05795
Transporters [BR:
sphk02000
]
Other transporters
Pores ion channels [TC:
1
]
SKP52_05795
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
AJA08084
UniProt:
A0A0A7PDP7
LinkDB
All DBs
Position
complement(1204707..1205900)
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AA seq
397 aa
AA seq
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MFLSALILAAAGEELSLPPPHGHLPHAHTHAPGETDETHGPVLLQATYTAELIGNASGGV
KRGTRYLDNFDLVFEADMEALVGWHGAQVHVYGLYNNGRSISGLVGDTQAVSNIESGTSA
LRLYEAWVDQKLGEHASLRVGLYDLNSEFDALDAAGLFVSSPHGIGTDFAQSGQNGPSIF
PSTSLATRLAVSPAEGWTVRAAVLDGVPGNPAYPGRTAVKLGHGDGALLVGEVEAPLGGG
KLLLGHWRYTAYFERNDGTAPGDGNAGTYVRAEVPLIERSGRKVDAFARLGTASGRYNMF
DRFASGGLKFSGWVPGREEDEFGIAFAAAFTSDSWRAATGASSSEVAVEATYRAQVASWL
AVQPNIHYVHRPSADRTIADALVIGLRAEASFSLFGF
NT seq
1194 nt
NT seq
+upstream
nt +downstream
nt
atgtttctttctgccctgatactcgcggcagccggcgaagagctcagcttgccgccgccg
cacggccatttgccgcacgcccatacccacgcgccgggcgagaccgacgaaacgcatggt
cccgtgttgttgcaagccacctacacggccgaattgatcgggaatgcgtcgggcggcgtg
aagcgcgggacacgctatctcgacaatttcgacctcgtgttcgaggccgatatggaggcg
ctcgtcggctggcacggggcgcaagtccatgtctatggcctctataacaatggtcgttcg
atcagcggcctcgtcggcgatacgcaggcggtcagcaatatcgaaagcggcacctcggcg
ctgcggctttatgaggcatgggtcgaccagaagctcggcgagcatgcctcgctgcgcgtc
gggctgtacgacctcaattccgaattcgacgcgctcgacgcagcgggcctgttcgtcagc
agcccgcacggcatcggcaccgatttcgcgcagagcgggcagaacgggccctcgatcttt
ccatcgacctcgctcgctacgcggctcgcggtatctcccgccgagggctggacggttcgc
gccgcggttctagacggggttcccggcaatccggcgtatcccgggcggacggcggtcaag
ctcggtcatggcgacggcgcattgctcgtcggcgaggtcgaggcaccgcttggcggcggc
aagctgctgctcggtcactggcgctataccgcctacttcgagcgcaacgacgggaccgcg
ccgggtgacggcaatgccgggacctatgttcgcgccgaggtcccgctcatcgaacgatcg
ggccgcaaggtcgacgcattcgcccggctcggcaccgccagcgggcggtataatatgttc
gaccgttttgcgagcggcggcctcaaattcagcggctgggttcccgggcgcgaagaggac
gagttcggcatcgcattcgccgcggccttcacgtcggactcctggcgcgcggcgacgggc
gcgtcgtcgtccgaggttgcggtggaggcgacctaccgcgcacaggtcgcatcgtggctc
gccgtccaaccgaacatccattatgtccaccgcccgtcggccgaccgcaccattgccgac
gcgctggtcatcggactgcgcgccgaggcgagtttcagccttttcggattttga
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