Sphingopyxis fribergensis: SKP52_14705
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Entry
SKP52_14705 CDS
T03542
Name
(GenBank) putative DNA helicase-like protein
Organism
sphk
Sphingopyxis fribergensis
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DUF4011
MTES_1575
AAA_11
AAA_30
DUF3320
AAA_12
AAA_19
DEAD
AAA_16
ResIII
Viral_helicase1
AAA_22
SLFN-g3_helicase
Helicase_RecD
nSTAND3
IstB_IS21
FtsK_SpoIIIE
PIF1
DUF3638
DUF559
AAA_7
Fer4_NifH
DAP3
Adeno_IVa2
Motif
Other DBs
NCBI-ProteinID:
AJA09823
UniProt:
A0A0A7PKR5
LinkDB
All DBs
Position
3138725..3143422
Genome browser
AA seq
1565 aa
AA seq
DB search
MESGRDDAQSGSARVSIQKLFDDTRKRLVETGTRNRLVHVNRANTRGNVVNVINERSDDI
WAILLSGKTMRFRALGHDVRKGDQVSEIILAEEPEDDGGADRYVDNQLDTRLGPDGLAKK
LLKIAREAKTAEEEQGVNILYLALGFLTWFEDQTSAVAREAPLVLLPVELVRNARTSTYD
LRMRDEDLITNLPLQQRLMEDFGIKLPTIEVGENWNPSNYFSQVDAVIADRARWKIDRDA
MQLGFFSFSKLLMYLDLALDAWPDQTLESHELTRGLLYEGFDVERPLFGSDDRLDDVLPP
DQMFHVVDADASQARVIEEVRSGRNLVVQGPPGTGKSQTITNIIAAAAKEGKTVLFVAEK
MAALSVVHDRLVKVGLGEVCLELHSKTANKKAVLAEIARTLNAAQAIPAMPQAPLALTET
RNQLNQIAAALHAPIDGTGESPFSVLARQARYIGMDAPPPTFDADLLTKMTRSQERALSD
DLLEFGALLQVVGAANLHPFWGVRALDLQPVELSRLEGDLAATADAARSLRDALDDPLEL
FGLSLARSLSSIPAVSDTLRCITNLPSGEAALARAIFDISDAPRLIEAIETAQAWRTLRD
AEASEFTDVAFEGDVASLRAPLVAGTTSFFARWGSAYRGASQQLAGMLRNPLPKAATARV
ELVDRLLEVKRLRSRWGDDEAFMSAALGEIWRGEWTDFNRVNDTVGWVAKARSAPLSIGA
DQAVQLGSDGSALTAMIDRLDRQGQVAHDAIHRAISIVQLDHAVFDGGVDGVDLIDIAAR
LATMAESTDRYAEWSRLCGLEKRLEAGGVAGLVARIADGSINGSAAVIELKFARAERLWR
EAIMTSPVLKEIGTLDRHALSREFAGLERKRLKENVTTILAEHLSQVPQGALGEMKVIRG
EIGKKRAHIALRRLFQQAPTALQRIKPVLLMSPISVAQYLTPGRLNFDLLVIDEASQVRP
EDALGAIARARKIVVVGDQKQLPPSSFFDRLVADDGDGDDEPEEGDEDLLGGAAALGSLE
SILSLCEARGLSSRMLQWHYRSRDPSLIRVSNREFYDDGLILPPSPLQEDPEYGLIFTKV
DGVYDKGGKRDNRKEGEAIVRRVAEHARAHPDLSLGIVTFSSAQKNTITELLELARRADG
PLDVFLREGQSEDLFVKNIENVQGDERDVILVSVGYGPTIAGGRLTSMTFGPVNGEGGER
RLNVLFTRARIRCEVFASFDPGDIDASRVSREGPRILRRFLEFAKSGKLEEAVVTGEEAD
TPFEEDVADVIRSFGYLADPQVGSAGFRIDIGVRHPNKPGTYLLAVECDGATYHSALWAR
ERDRLRQDVLEHLGWRFHRIWSTDWFYNRRSEIERLRMALSEAQDKGAVVQISGANTPRD
VPTIEAPAMETFVVPPTVERTMPPYVRAHFPVSSHLEPHEAPISILGPLARKIVEVEGPI
SADEVARRIAACFGREKAGRRILAVAKQALSAQRRIAPDLHSEENFWFVTAQREAPPVRD
RSAEYGATLKADAISMIEIRAALAIARDDNAGGTDADLIRFAARLLGFRRVGSDLQTRLA
QGLIG
NT seq
4698 nt
NT seq
+upstream
nt +downstream
nt
atggaatccggtcgcgacgacgcgcaatcaggttccgctcgcgtgtcgattcaaaaattg
tttgacgacactcgcaagcgattggttgagactgggacacgtaataggcttgtccacgtc
aatcgcgccaacacgcgtgggaatgttgtcaatgtcataaatgagcgctccgatgacatt
tgggcgattctcctttccggcaaaacgatgcgttttcgtgcgctcgggcatgacgtacgc
aaaggcgatcaggtctctgaaattatcttagcggaagaaccggaggatgatggaggggcg
gatcgctacgtcgacaatcagttggatacgcgcttgggccccgacggtcttgcgaagaaa
ctgctcaaaatcgcacgcgaggcgaaaacagccgaggaagagcaaggcgtcaacattctt
tacctcgcgctgggtttcctcacgtggttcgaagaccagacttcggcagtagcgcgagaa
gccccgctggtgctgcttcccgtagagttggttcgaaacgctcgcacatcgacttatgat
ttgcgaatgcgtgacgaagatctgattacaaatctgccgttgcaacagcgcctcatggaa
gatttcggaattaagctgccgacgattgaggttggtgagaattggaatccgtccaactat
ttttcacaagtcgatgcagtaattgcagatcgcgcccggtggaagattgatcgcgacgcg
atgcaactcggatttttctctttctcgaagttgctaatgtatcttgatctcgcgctcgac
gcgtggccagaccaaactctggaatcccatgaactaacccgcggccttttgtacgaaggc
ttcgatgttgaacgaccgctgtttgggtccgatgaccggcttgacgacgtcctacctcct
gatcaaatgtttcacgtggtcgacgcggacgcaagccaagcgcgcgttatcgaagaagtt
agaagcgggcgaaatctagtcgtccaggggccacccggaaccggcaaaagccagacgatt
accaatatcatcgcggcggctgccaaggaaggcaaaaccgtcctttttgtcgccgaaaaa
atggcggccctctcggtagtacatgaccgcttggttaaagtgggcttgggcgaagtctgc
ctcgaattgcattcaaagacggccaacaaaaaggccgtccttgccgagatcgcccggacc
ctcaatgccgcccaagcgatcccggccatgccacaagcgccgctggcgttgacggaaacg
cgcaatcaactcaaccaaatcgccgcagcattgcacgccccaatagacgggacgggagaa
tcgccattctccgttctcgcgcgtcaggcccgttatattggaatggacgctccgcctccg
acattcgacgctgatcttctgacaaagatgacacggagccaagagcgggctttgtccgat
gacctccttgagtttggcgcacttttacaagttgttggagctgcaaacctccatccgttt
tggggggttcgcgcactggatttgcagcctgtcgagctgtctcgccttgaaggcgatctc
gcagccactgcagacgccgcgcgttctttgcgggatgcgctagacgatcctcttgaatta
ttcggcctgtcgctagctcgatcgctttcatccataccggccgtttccgatacgcttcgc
tgtattaccaacttaccctcaggtgaggcagcacttgcgcgtgcaatcttcgacatatcc
gacgcaccaaggctcattgaagctattgagaccgctcaggcgtggcgaaccttgcgcgat
gccgaagcctccgagtttaccgatgtagcatttgaaggcgatgttgcttctttgcgagcc
ccgctggtcgcaggcaccacttcatttttcgcgcggtggggctcggcatatcgcggcgca
tcccagcaattggccgggatgcttcggaacccactgccaaaagccgctacggctcgtgtc
gaactcgtcgatcgcttgctcgaagttaagcgtcttaggtcacgttggggagacgacgag
gcattcatgagcgcggcactcggcgaaatctggcgcggtgaatggaccgatttcaaccgc
gtcaacgatacagtcggatgggtcgcaaaggctcgcagtgccccactatccatcggcgcg
gatcaggcggtacagcttggctccgatggatcagctttgacagcgatgatcgaccgcttg
gatcgacaagggcaagtagcgcatgacgcaatccatagggccatctcgattgtgcaactg
gatcatgcggtattcgacggcggcgtagatggtgtggatctgatcgacattgccgctcgc
ctcgcaacgatggcggagtctacggaccgttacgccgaatggtcgcgattgtgcggattg
gaaaagcgtctcgaagcagggggtgtggccggactggtcgcaagaatagctgacggtagc
atcaacggcagcgccgcagttatcgaactcaaatttgcccgcgccgaaaggttatggcga
gaagcaatcatgacttcgccggttctcaaggagatcggaacgctcgaccgtcatgccctt
tcgcgagaattcgccggtctagagcgcaaaagattgaaggaaaacgtcaccacaatcttg
gccgaacacctttcccaagtaccgcagggggcattgggcgagatgaaagtcataagggga
gaaatcgggaaaaagcgcgcgcatattgcgcttcggcgcttgttccagcaagcacctacc
gcgctccagcggataaagccggtgttgttgatgagccctatatcggtcgcgcaatatctg
acgccgggccggttaaatttcgacctgctcgttatcgatgaagcgagccaagtgcggcca
gaggatgctttgggagcaatcgcacgggctcggaaaattgtcgtcgtaggcgatcagaag
caactcccaccatcatcattcttcgaccgcttagttgccgacgatggggatggagacgac
gaaccggaagagggcgatgaggatttgctgggcggagcagcggcgctgggatcgctcgaa
agcatattgtctttatgcgaagcccgagggctctcgtcccgaatgcttcagtggcattat
cggtcgcgtgacccatcgttgatacgggtctcaaaccgcgaattttacgatgacgggctg
atccttcctccatcacccctgcaggaagatcctgaatacgggctcattttcacgaaggtt
gacggcgtttacgataagggcggcaaacgtgacaatcgcaaggaaggggaagccatcgtg
cggcgtgttgctgaacatgcacgcgcgcaccccgatttgtcgctggggattgtgaccttt
tcgtcggcgcagaaaaatacaattactgaattacttgagctagcacggcgcgccgacggg
ccgctcgacgtcttccttcgggaaggacagtccgaagaccttttcgtgaagaacatcgaa
aatgtgcagggtgacgaacgcgatgtgatccttgtcagcgtaggctatggccccacaatc
gcaggcggacggctgaccagcatgactttcggcccagtcaacggcgaaggtggtgagcgg
cgtttgaatgtgcttttcacgcgcgcacgtatcaggtgtgaagtgttcgcttccttcgat
cccggagacatcgacgccagccgcgtatcgcgcgaaggccctcgcatacttcgacgcttc
ctagagttcgccaaatcagggaaactcgaagaagcagttgtgacgggcgaggaagccgac
acacccttcgaagaagatgttgccgacgtcatccgatctttcggatatctcgccgaccct
caagtcggttcggcaggcttccggatcgatattggtgtgcgtcatcccaacaagccgggc
acctaccttttggcggtggaatgcgacggcgcgacctatcattccgccttatgggcgcgg
gagcgcgaccggctccggcaggatgtccttgagcatctcggctggcggtttcaccggatt
tggagcaccgactggttctataatcgtcgctcggaaatcgaacgattgcgaatggcactt
tccgaagcgcaggacaaaggggcagtggtccaaatttcaggcgccaacacgccacgcgat
gttcccaccatcgaagcgccagcaatggaaactttcgttgttccaccaacagttgaacga
accatgcctccgtatgttcgtgcgcatttcccagtaagtagtcacctcgagcctcacgag
gcaccaatctctatattaggcccgttggctcgaaaaattgtcgaggttgagggaccgatc
tctgccgacgaggtcgcacgtcgtatcgcagcctgctttgggcgtgaaaaagctgggcgg
agaatattggctgtggccaaacaagcgctaagtgcgcaacggcgcatcgctcccgatttg
cactccgaagagaatttttggttcgtgactgctcagcgcgaggctcctcccgtacgggat
cgtagcgcggaatatggtgcaacgctcaaagcggatgctatttccatgattgaaattcgc
gctgcgctggcgattgcccgcgatgacaatgctggcgggactgatgcagacctaatacgg
tttgccgctcgattgctaggcttccgccgggttggatcagatttgcaaacacggttggcg
caagggctgataggctag
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