Sphingopyxis fribergensis: SKP52_18620
Help
Entry
SKP52_18620 CDS
T03542
Name
(GenBank) Ku protein
KO
K10979
DNA end-binding protein Ku
Organism
sphk
Sphingopyxis fribergensis
Pathway
sphk03450
Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:
sphk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03450 Non-homologous end-joining
SKP52_18620
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
sphk03400
]
SKP52_18620
DNA repair and recombination proteins [BR:
sphk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
Two-component NHEJ DNA repair complex
SKP52_18620
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Ku
Motif
Other DBs
NCBI-ProteinID:
AJA10594
UniProt:
A0A0A7PKT2
LinkDB
All DBs
Position
3944553..3945419
Genome browser
AA seq
288 aa
AA seq
DB search
MAARAYWKGQIRLALVSIPVEIYSATKSGAAVTFRQIHEPSGKPIKYEKIVPGIGAVDHD
EIVKGFELSKGNYVLLDEEEIEAVKLESKRTLELVQFVDTDAIDVLYYTKPYYVVPADEL
AEEAYIVLREALKRTKKVGLGQLSLRGQEQLVALRPCGRGLVLEVLRYADEVNKAANYFR
DVGNDKPDADLLDLAETLIAKKSGEFDASDYHNHYIDALKRVIAKKAKAKGKRVLEDVEE
PADTGRGSNVIDLMAALKASVDGKKTAPAKAAPAKKAPAKKQPARKRA
NT seq
867 nt
NT seq
+upstream
nt +downstream
nt
atggccgcacgtgcatattggaagggtcagatccggctcgctttggtgtcgattccggtc
gaaatctattcggcgaccaaatcgggcgccgcggtcacctttcgccagatccacgaaccg
agcggcaagccgatcaaatacgaaaaaatcgtgcccggcatcggcgcggtcgaccatgac
gagatcgtcaaggggttcgaactgtcgaaaggcaattatgtgctgctcgatgaggaggag
atcgaggcggtcaagctcgagagcaagcgcacattggagcttgtccagttcgtcgatacc
gacgcgatcgacgtcctctattataccaagccctattatgtcgttcccgccgacgagctc
gccgaagaggcctatatcgtccttcgcgaagcgctgaagcgcaccaagaaggtcgggctc
ggccagctatcgctccgcggacaggaacagcttgtcgcgctgcgcccgtgcgggcgcggc
ctcgtgctcgaagtgctgcgctacgccgacgaggtgaacaaggcggcaaattatttccgc
gacgtcggcaatgacaagcccgatgccgacctgctcgaccttgccgaaacattgatcgcc
aagaagagcggcgaattcgacgccagcgactatcacaaccattatatcgacgcgctcaaa
cgcgtgattgccaagaaagcgaaggccaagggcaagcgcgtcctcgaagatgtcgaggaa
cccgctgataccggccgcggttcgaacgtcatcgacctgatggcggcgctcaaggcgtcg
gtcgacggcaagaagaccgcgcccgcgaaggcggcgccggccaagaaggccccggcgaag
aagcagccggcgcgcaagcgggcttag
DBGET
integrated database retrieval system