KEGG   Sphingopyxis fribergensis: SKP52_18620
Entry
SKP52_18620       CDS       T03542                                 
Name
(GenBank) Ku protein
  KO
K10979  DNA end-binding protein Ku
Organism
sphk  Sphingopyxis fribergensis
Pathway
sphk03450  Non-homologous end-joining
Brite
KEGG Orthology (KO) [BR:sphk00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03450 Non-homologous end-joining
    SKP52_18620
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:sphk03400]
    SKP52_18620
DNA repair and recombination proteins [BR:sphk03400]
 Prokaryotic type
  DSBR (double strand breaks repair)
   NHEJ (non-homologous end-joining)
    Two-component NHEJ DNA repair complex
     SKP52_18620
SSDB
Motif
Pfam: Ku
Other DBs
NCBI-ProteinID: AJA10594
UniProt: A0A0A7PKT2
LinkDB
Position
3944553..3945419
AA seq 288 aa
MAARAYWKGQIRLALVSIPVEIYSATKSGAAVTFRQIHEPSGKPIKYEKIVPGIGAVDHD
EIVKGFELSKGNYVLLDEEEIEAVKLESKRTLELVQFVDTDAIDVLYYTKPYYVVPADEL
AEEAYIVLREALKRTKKVGLGQLSLRGQEQLVALRPCGRGLVLEVLRYADEVNKAANYFR
DVGNDKPDADLLDLAETLIAKKSGEFDASDYHNHYIDALKRVIAKKAKAKGKRVLEDVEE
PADTGRGSNVIDLMAALKASVDGKKTAPAKAAPAKKAPAKKQPARKRA
NT seq 867 nt   +upstreamnt  +downstreamnt
atggccgcacgtgcatattggaagggtcagatccggctcgctttggtgtcgattccggtc
gaaatctattcggcgaccaaatcgggcgccgcggtcacctttcgccagatccacgaaccg
agcggcaagccgatcaaatacgaaaaaatcgtgcccggcatcggcgcggtcgaccatgac
gagatcgtcaaggggttcgaactgtcgaaaggcaattatgtgctgctcgatgaggaggag
atcgaggcggtcaagctcgagagcaagcgcacattggagcttgtccagttcgtcgatacc
gacgcgatcgacgtcctctattataccaagccctattatgtcgttcccgccgacgagctc
gccgaagaggcctatatcgtccttcgcgaagcgctgaagcgcaccaagaaggtcgggctc
ggccagctatcgctccgcggacaggaacagcttgtcgcgctgcgcccgtgcgggcgcggc
ctcgtgctcgaagtgctgcgctacgccgacgaggtgaacaaggcggcaaattatttccgc
gacgtcggcaatgacaagcccgatgccgacctgctcgaccttgccgaaacattgatcgcc
aagaagagcggcgaattcgacgccagcgactatcacaaccattatatcgacgcgctcaaa
cgcgtgattgccaagaaagcgaaggccaagggcaagcgcgtcctcgaagatgtcgaggaa
cccgctgataccggccgcggttcgaacgtcatcgacctgatggcggcgctcaaggcgtcg
gtcgacggcaagaagaccgcgcccgcgaaggcggcgccggccaagaaggccccggcgaag
aagcagccggcgcgcaagcgggcttag

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