Sphingorhabdus lutea: LPB140_09725
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Entry
LPB140_09725 CDS
T04602
Name
(GenBank) hypothetical protein
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
sphl
Sphingorhabdus lutea
Pathway
sphl03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
sphl00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
LPB140_09725
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
sphl03019
]
LPB140_09725
Enzymes [BR:
sphl01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
LPB140_09725
Messenger RNA biogenesis [BR:
sphl03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
LPB140_09725
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
Motif
Other DBs
NCBI-ProteinID:
APG63020
UniProt:
A0A1L3JD26
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All DBs
Position
2049029..2050264
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AA seq
411 aa
AA seq
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MTHIMMKLPNLSWWKSPALHKIVEALIDDRSEHARVVGGAVRNSLLGIDVSDIDLATRLR
PEIVIEKLTAIGAKTIPTGIAHGTITAIIDGEKFEITTLRRDVSTDGRHATISFSDEWQD
DATRRDFTINALYADVKTGQIYDYFGGIDDLNRRNLIFIGDANERIKEDYLRILRYFRFL
ILMDNVETDAATLAACAHGAPNLRSISRERISDEFQKILSKENIVISISAMQNAQIFDHF
MPEIIPDAAEKIADLIKREKKLGISPKWQRRLAAILPHDPKLTYKIAARLKMSKKNMLLM
AILSDRQEINDINVRKLAFEHGLENATDIALLYGHDDDYAAIISDIQKWEIPYFSLNGSQ
LIDAGIEKGPKVSALVKQIKNKWMDCGFPAGQSFDELVNQMISETKEFDKN
NT seq
1236 nt
NT seq
+upstream
nt +downstream
nt
atgacgcatattatgatgaaattgcctaatctatcttggtggaaatcccctgccctacac
aaaattgttgaggcattaattgatgatcgcagtgaacatgctcgcgtcgtgggcggcgcg
gtgcgaaatagcctgttggggattgatgtttcggatattgatttggcgacaaggttacgc
cccgaaattgtgatagaaaaattaaccgccattggcgcgaaaaccatccccaccggcatt
gcccatggcacaattaccgcaattatagatggtgagaaatttgaaatcaccacgctgcgc
cgtgatgtttcaaccgatggccgccatgcaaccattagtttttccgatgaatggcaggat
gatgccacgcggcgcgactttaccatcaacgccctatatgccgatgtgaaaaccggccaa
atttatgattattttggcggcatagatgatttaaatcggcgtaatttaatttttatcggc
gatgctaatgaacggataaaagaagattatcttcgtatcttgcgatattttcgtttttta
atccttatggataatgtcgaaactgatgctgccacattggctgcatgcgcacatggtgca
cccaatttacgcagcatttctagggagagaatatcggacgaatttcaaaaaattctttcc
aaagaaaatatagttatttccatttctgccatgcaaaatgcccaaatatttgatcatttc
atgcccgaaattattcctgatgcggctgagaaaatagcagatttaataaaaagagaaaaa
aagcttggcatttcaccaaaatggcaacgccgccttgccgccattttgccccatgatcca
aaattgacatataaaatcgccgcaaggttaaaaatgtcaaaaaagaacatgttactgatg
gccatattgtccgatcggcaagaaattaacgacatcaatgttcgtaaattggcatttgag
catggcttggaaaatgccaccgatatcgcattattatatggtcatgacgatgattatgcc
gccatcatttccgatattcaaaaatgggaaatcccatatttttcattaaatggttcgcaa
ttaattgatgcgggcattgaaaaagggccaaaagtatctgccctagtcaaacagattaaa
aataaatggatggattgcggctttcctgccggacaatcatttgatgaactggtcaatcaa
atgatatcagagacaaaggaatttgataaaaattga
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