Sphingobacterium sp. B29: BV902_05030
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Entry
BV902_05030 CDS
T04670
Name
(GenBank) hypothetical protein
KO
K23514
RNA polymerase sigma-19 factor, ECF subfamily
Organism
sphn
Sphingobacterium sp. B29
Pathway
sphn02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
sphn00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
BV902_05030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
sphn03021
]
BV902_05030
Transcription machinery [BR:
sphn03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
BV902_05030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4_2
Sigma70_r2
Sigma70_ECF
HTH_40
HTH_7
GerE
DNA_pol3_delta_C
HTH_Tnp_ISL3
HTH_23
HTH_29
HTH_11
CTD6
HTH_10
HTH_24
RFC1
TnsD
Sigma70_r4
Terminase_5
HTH_5
Complex1_LYR_1
HTH_28
HTH_38
HTH_Mga
Motif
Other DBs
NCBI-ProteinID:
APU95776
LinkDB
All DBs
Position
1188637..1189257
Genome browser
AA seq
206 aa
AA seq
DB search
MKTTEANVDNHYVLRFKEGDPIAFAHFFERYWEDLYTVAFRHLREEDQAKDLVQEVFIHI
WEKRSLVSTEYSDIKFYFHKALKNKILNYYASERVRKQVLEKSMERMDAFSNLDSQAFAR
YKALEAIVDDSIDKLPRLMKAVYLMRSDNYSITQIAKELNLAEQTVKNYLSEAKKIMRYE
LTRRFADHDSVFLLLAGSYLLYDYLI
NT seq
621 nt
NT seq
+upstream
nt +downstream
nt
gtgaaaactaccgaagccaatgtagataaccactatgtgttgcgttttaaagaaggtgac
cccattgcctttgcccatttctttgagcggtattgggaggatctatacaccgtcgctttt
cgtcatcttcgggaagaggatcaggctaaggatcttgtgcaggaagtattcatccatatc
tgggaaaaacgatcgctcgtgagtactgaatactccgatataaaattctatttccacaaa
gccctcaaaaacaaaatactgaattactacgcctcggagcgtgtacgaaaacaggtcttg
gagaaatcaatggaacgtatggacgctttttccaatttggatagccaggcctttgccagg
tataaggcgctggaggctattgtggatgattcgatagacaaattacctagattgatgaaa
gcagtctacttaatgcgttctgacaattattcaataacacaaattgccaaggaactcaat
ctggctgaacagaccgttaagaactacctgtcagaggccaaaaagattatgcggtacgaa
ttgacaagaaggtttgcggaccacgattctgtatttttattgctcgcaggaagctatctc
ctttatgattatttaatataa
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