Sphingopyxis sp. 113P3: LH20_16975
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Entry
LH20_16975 CDS
T04069
Name
(GenBank) diguanylate cyclase
Organism
sphp
Sphingopyxis sp. 113P3
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Gene cluster
GFIT
Motif
Pfam:
EAL
GGDEF
PAS_4
PAS
PAS_9
Motif
Other DBs
NCBI-ProteinID:
ALC13655
UniProt:
A0A0M4D4A2
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Position
3446605..3448971
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AA seq
788 aa
AA seq
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MTGFVKSLLTDHVPADDVSARALMGLGPRSEDSGDLRQLQLAPLRGKGKLRLWMGIGMAL
VAAFTMVTRLPWGLAGGWLTTALLFSLWSSRSFAVLPLGDPKLSSASIFRLCHRHALYSA
LLWSAPFWFEGVSPTLGHVLSLWPIALLMMLTLAMVAHSLPLACALFILPVSVSAGAALV
LAGAPQLAVIALVAGLLLCGFCIRFAQNHIRFRRAEETLHEKTETVSLLLREFEETSADW
LWQTDNSRRLVHVSPRLAFAFGASPDALEGMPLLQALAGDAWETGDFPKSLHDLAERMKR
RESFSNLIVPVTIGGKSHWWELSASPRLDDQGKFLGFRGVGSDVTEQRASAEQIARMARF
DNLTGLPNRLSLHEDLGRALAHAQGMKARCALMMIDLDRFKAVNDTLGHPTGDQLLAQVA
TRLKSLMGSDMTCGRLGGDEFAVVLHDVSSASEAEAIAHRIIAVLSRPYVVDNHQLFVGA
SIGYAMGPQDGATVETLTRNADLALYKSKDKGGNVVAPYVASLHAQAEERRVMEQELRGA
LERREFELYYQPVVTAEDGTLNGFEALIRWNNQTLGNVSPARFIPLAEDSRLIAPIGEWV
LRNACAEAMRWPSNLKVAINVSAEQLTDPKFASLVVSALAQSGLPPQRLEIEVTESVFLR
DGGGAAQLLDQLIALGIRLSLDDFGTGYSSLGYLRKTQFSTIKVDRTFVVGAAKGHTESI
AIIRAVVALADSLGMATTAEGAETEREVETIRSLGCSNIQGYYYGRPMPASDVLTLFRPP
ESRSIAAA
NT seq
2367 nt
NT seq
+upstream
nt +downstream
nt
atgacgggctttgtgaagagcctgctaaccgaccatgtaccggccgacgatgtttccgcc
cgcgccctgatgggactgggaccgagaagcgaggatagcggtgacctgcgtcagcttcag
cttgccccgctccgcggcaaggggaagctgcggctatggatgggtatcggcatggcgctc
gtcgcggccttcaccatggtgacccgcctgccctggggacttgcgggcggctggctgacg
accgcgctgctgttcagcctctggtccagtcgctcctttgccgttctgccgctcggagat
ccaaaactttcgagcgcctcgatcttccggctctgccaccgccacgccctctattcggcg
ctcctctggtcggctcccttctggttcgagggtgtatcgccaacgctcgggcatgtcctg
tcgctctggccgatcgcattgctgatgatgctgactctcgcgatggtcgcgcacagcctt
ccgctcgcctgcgcgctcttcatcctgcccgtgagcgtgtcggccggggcggcgctggtc
ctcgccggagcgccgcaactcgccgtgatcgcgctcgtggcggggctccttctttgcggc
ttctgcattcgtttcgcgcaaaatcatatccgctttcgccgggcagaagaaacgctgcac
gagaagaccgagacggtcagtctgctgctgcgcgagttcgaggaaacatcggccgactgg
ctgtggcagaccgacaacagccgccgcctcgttcacgtctccccgcgcctcgcctttgca
ttcggtgcatcgcccgacgctcttgaaggcatgccgctgcttcaggcgcttgcgggcgat
gcctgggaaaccggcgactttcccaagagccttcacgatctcgccgagcgcatgaaaagg
cgcgaaagcttttccaacctgatcgtcccggtgacgatcggcggcaagtcgcactggtgg
gaactctccgcgtcgccgaggctcgatgatcagggcaagtttctcggtttccgcggggtc
ggttccgacgttaccgaacagcgcgcatcggccgagcagatcgcccgcatggcgcgtttc
gacaacctcacgggccttcccaaccggctgagcctgcacgaagacctcggccgcgcgctc
gcgcatgcccagggcatgaaagcgcgctgcgcgctcatgatgatcgacctcgaccgcttc
aaggctgtcaatgatacgctcggccacccgaccggcgatcagctgctcgcgcaggtcgcg
acccggctcaagagcctgatgggcagtgacatgacctgcggccggctcggcggagacgag
tttgcggtggtgctccacgacgtcagctccgcatcggaggccgaagcgatcgcgcaccgg
atcatcgcggttctgagccgtccctatgtcgtcgacaatcatcagctcttcgtcggcgcg
agcatcggttatgcgatggggccgcaggacggcgcgacggtcgaaaccctcactcgcaac
gccgatcttgcgctctacaagtcgaaggacaagggcggcaatgtcgtcgccccctatgtg
gcttcgctccacgcgcaggcggaggagcggcgcgtgatggagcaggaactgcgcggtgcg
ctcgagcgccgcgagttcgagctttactatcagccggtggtcactgcggaagatggcacg
ctcaacggcttcgaggcgctcatccgctggaacaaccagacgctcggaaatgtctcgcct
gcccgcttcatcccgctcgccgaggacagccggctgatcgcgccgatcggtgaatgggtg
ctgcgaaatgcctgcgccgaagcgatgcgctggccctcgaacctcaaggtcgcgatcaac
gtttcggccgaacagctcaccgaccccaaatttgcctcgctcgtcgtctccgcgctcgcc
cagagcggtctcccgccccaaaggctcgagatcgaggtgaccgaaagcgtgttcctgcgc
gacggcgggggtgcggcccaattgctcgaccagctcatcgcgctcggcatccgtctcagc
ctcgacgatttcggtaccggctattcgtcgctcggctatcttcgcaagacgcagttctcg
acaatcaaggtcgatcggaccttcgttgtcggcgccgccaaggggcacaccgagtcgatc
gcgatcatccgcgccgtcgtcgcgctcgcggacagcctcggcatggcgaccaccgcagaa
ggcgccgagaccgagcgcgaggtcgaaacgatccgcagcctgggctgcagcaatatccag
ggctattattacggacgcccgatgcccgcgagcgacgtgcttaccctcttccggcccccc
gaatcgcgctccatcgccgcggcctga
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