Uncultured Sphingopyxis sp. UC10: SPPYR_1258
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Entry
SPPYR_1258 CDS
T05531
Name
(GenBank) putative Carbohydrate-selective porin OprB
KO
K07267
porin
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
sphu02000
]
SPPYR_1258
Transporters [BR:
sphu02000
]
Other transporters
Pores ion channels [TC:
1
]
SPPYR_1258
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
BBP2
Motif
Other DBs
NCBI-ProteinID:
SBV32378
UniProt:
A0A1Y5PQT3
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All DBs
Position
SPPYR:1355314..1356474
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AA seq
386 aa
AA seq
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MRNAGALFACAVLTPEATYAQTESAKDDPVKVVDFGASYVTDVIGNLDGGEKKGFVWLGR
ADATISVDGSAFGWDGAEIFVDVLAVQSADFSGDYVGDGQTVSNVQGDSAVRPIEAWIAG
PISDDVSVKLGMIDLNSEFDVQSVGKHFVGSSHGIGPEFSQSGANGPSIFPAGATAIMLR
YESASWSARLGLFDAVAGSRKNPRQAAFRFPGTTGALLVGEVDRKLARGGEAQIGIWRYT
PRFERIDTTRGGRGVSQGAYAMIETPLATHRDAKLEGWMRIGVASSSVNEIGAYAGGGLT
YGDEAQRVGIAVAHARRGDAVMREAARHNARSNRAETAIELTYAYRVTPWLTIQPDLQYV
VNPGWEPSRSDATVAGLRFSFAWPAD
NT seq
1161 nt
NT seq
+upstream
nt +downstream
nt
atgcgcaatgcaggtgctcttttcgcgtgtgcggttctgacgcccgaggccacttatgcg
cagaccgaatcagcaaaggacgatccggtaaaagtcgttgatttcggagcatcctatgtg
accgacgtgatcggcaatctggatggcggcgagaagaaggggttcgtctggctcggccgt
gccgatgccacgatatcggtcgatggatcggccttcggctgggacggtgccgagatattt
gtcgatgtactggctgtgcagagcgctgatttctcgggcgactatgtcggagacgggcag
acagtcagcaatgtccagggcgatagcgcggtgcgtccgatcgaagcgtggatcgcgggc
ccgatcagcgatgatgtgtcggtgaagcttggcatgatcgacctcaattcggagtttgac
gttcaatcagtcggcaagcatttcgtcgggagttcccacggaatcggtcccgaattctct
cagtcaggcgccaatggcccgtccatatttccggccggagcgactgcaataatgcttcgc
tatgaaagcgcgagttggagtgcgcgcctgggcttgttcgatgcggtggcaggcagccgc
aagaatccgcgccaggctgctttccgcttccctggaacaaccggcgcactgttggtgggc
gaggttgatcggaaacttgcacgcggcggcgaggcgcagataggtatatggcgttacacc
ccacgctttgagcgcatcgacactacccgcggggggcgcggcgtgagccaaggcgcctat
gcgatgatcgagactccgctggcgacacatcgtgacgcaaagctcgagggctggatgcgt
atcggagtcgcgagcagcagcgtgaacgagatcggggcctatgcgggcgggggcctgacc
tatggcgacgaggcgcagagggttggtatcgcagtggcgcacgccaggcgcggcgatgcg
gtgatgcgtgaagcagcccgacacaacgctcggtcgaaccgcgcggagactgcgattgag
ctcacctatgcgtaccgcgtaacgccttggctgaccattcagcccgacctgcagtatgta
gtcaatcccggctgggagccgagccgatccgatgcaacagtcgcgggcctgcgtttcagc
ttcgcctggcctgccgactga
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