Uncultured Sphingopyxis sp. UC10: SPPYR_1967
Help
Entry
SPPYR_1967 CDS
T05531
Symbol
trpB
Name
(GenBank) tryptophan synthase beta chain
KO
K01696
tryptophan synthase beta chain [EC:
4.2.1.20
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Pathway
sphu00260
Glycine, serine and threonine metabolism
sphu00400
Phenylalanine, tyrosine and tryptophan biosynthesis
sphu01100
Metabolic pathways
sphu01110
Biosynthesis of secondary metabolites
sphu01230
Biosynthesis of amino acids
Module
sphu_M00023
Tryptophan biosynthesis, chorismate => tryptophan
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
SPPYR_1967 (trpB)
00400 Phenylalanine, tyrosine and tryptophan biosynthesis
SPPYR_1967 (trpB)
Enzymes [BR:
sphu01000
]
4. Lyases
4.2 Carbon-oxygen lyases
4.2.1 Hydro-lyases
4.2.1.20 tryptophan synthase
SPPYR_1967 (trpB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PALP
Motif
Other DBs
NCBI-ProteinID:
SBV33087
UniProt:
A0A1Y5PZY6
LinkDB
All DBs
Position
SPPYR:2094145..2095356
Genome browser
AA seq
403 aa
AA seq
DB search
MTQLPNSLRSGPDERGHFGQFGGRYVAETLMPLILDLERHYRAAQADPAFKAEFDDLLKN
YVGRPSPLWFAERLTEHLGGAKIYLKREDLNHTGAHKINNCIGQILLAKRMGKTKIIAET
GAGQHGVATATVAALFGLPCTIFMGAVDVARQQPNVFRMKLLGAEVVAVESGAKTLKDAM
NEALRHWVANVDDTFYIIGTVAGPHPYPELVRDFQSVIGDEAKAQILEAEGRLPDMLIAP
VGGGSNAIGLFHPFLDDEGVEIVGVEAAGEGLDKKHAASLAGGRPGILHGNKTYLLQDED
GQITEAHSISAGLDYPGIGPEHSWLHEIGRVRYEPVTDAEALASFQKLTRLEGIIPALES
AHAIAAAERIAPTLGKDKVIIVNCSGRGDKDIFTVADALGVEL
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgacccagcttcctaacagtcttcgctccgggcccgacgaacggggccatttcggccag
ttcggcggccgttatgtcgccgaaacgctgatgccgctgatcctcgacctcgaacgccat
tatcgcgccgcgcaggccgacccagcgttcaaggccgagttcgacgatctgctcaaaaac
tatgtcggccgcccgagcccgctctggttcgccgagcggctgaccgagcacctcggcggg
gcgaagatttacctcaagcgcgaggatctcaaccacaccggcgcgcacaagatcaacaat
tgcatcggccagatcctgctcgcgaaacggatgggcaagacgaagatcattgccgagacc
ggcgcgggccagcacggcgtcgcgaccgcgaccgtcgcggcgctgttcggcctgccctgc
accatcttcatgggcgcggtcgatgtcgcgcggcagcagccgaacgtgttccgcatgaaa
ttgctcggcgccgaggtggtcgcggtcgagagcggcgcgaagacgctgaaggatgcgatg
aacgaggcgctgcgccactgggtcgcgaacgtcgacgacactttctacatcatcggcacc
gtcgcgggcccgcacccctatcccgaactcgtccgcgacttccagtcggtgatcggcgac
gaggcgaaggcgcagatattggaggccgaaggccgcctccccgacatgctcatcgccccc
gtcggcggcggctcgaacgcgatcggcctcttccaccccttcctcgacgatgagggcgtc
gagatcgtcggcgtcgaggcggcgggcgaagggctcgacaagaaacatgccgcgagcctc
gcgggcggccgcccgggcatcctccacggcaacaagacctatctcttgcaggacgaggac
ggccagatcaccgaggcgcacagcatctcggcgggcctcgactatccgggtatcgggccc
gaacatagctggctccacgaaatcggccgcgtccgctacgaacccgtcaccgacgccgag
gcgctcgccagcttccagaagctgaccaggctcgaaggcatcatccccgcgctcgaaagc
gcgcacgccatcgccgccgccgaacgcattgcgccgacgctcggcaaggacaaggtcatc
atcgtcaactgctcggggcgtggcgacaaggacatcttcaccgtggcggatgcgttgggg
gtggaactgtga
DBGET
integrated database retrieval system