Uncultured Sphingopyxis sp. UC10: SPPYR_3131
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Entry
SPPYR_3131 CDS
T05531
Name
(GenBank) Pseudouridine synthase
KO
K06179
23S rRNA pseudouridine955/2504/2580 synthase [EC:
5.4.99.24
]
Organism
sphu
Uncultured Sphingopyxis sp. UC10
Brite
KEGG Orthology (KO) [BR:
sphu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03009 Ribosome biogenesis [BR:
sphu03009
]
SPPYR_3131
Enzymes [BR:
sphu01000
]
5. Isomerases
5.4 Intramolecular transferases
5.4.99 Transferring other groups
5.4.99.24 23S rRNA pseudouridine955/2504/2580 synthase
SPPYR_3131
Ribosome biogenesis [BR:
sphu03009
]
Prokaryotic type
rRNA modification factors
23S rRNA modification factors
SPPYR_3131
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PseudoU_synth_2
Replicase
Motif
Other DBs
NCBI-ProteinID:
SBV34251
UniProt:
A0A1Y5PW92
LinkDB
All DBs
Position
SPPYR:3278516..3279733
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AA seq
405 aa
AA seq
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MSEPKAHFDGATIAEEDDGIRLDRWFKRHRPGTPHALLARWARSGQLTLDGKKADVSDRI
AGGQKLVMPIPPVEAEARPARKGRPLTDADIELATSMLIHRDASAIVLNKLPGLATQGGT
KTDQHVDGLLDALKYDAPVRPKLVHRLDKDTSGALLIARSPRAAAWFAKSFSNRSARKTY
WAIVVGVPDIAQGEIDLPLAKQPGSGGEKMHVHDSGLPAKTRYRIIERAGNSAAWVELQP
LTGRTHQLRVHMAAIGHPIVGDGKYGGKGAFLTGTISRKMHLHSRRLRIDHPDGGAIDIS
AEVPEHFAASLDALGFDPLLGEVGIDDVAKGPPPKAAAKAAAKAHSKAIRKARRGERRGR
TATSKPTDHVGKPKPKPAKVKAKPGKPAGRKPAAKKSPARPARPR
NT seq
1218 nt
NT seq
+upstream
nt +downstream
nt
atgagcgaacccaaggcccatttcgacggcgcgacgattgccgaggaggatgacggcatc
cgcctcgaccgctggttcaagcgccaccggccgggaacgccgcacgccctgctcgcgcgc
tgggcgcgttcggggcagctgacgctcgacggcaagaaggccgatgtgtccgaccggatc
gcgggcggacagaagctcgtcatgccgatcccgccggtcgaggccgaagcgcgcccggcg
cgcaaggggcggccactgaccgacgccgacatcgaactcgcaacgtcgatgctgatccac
cgcgacgcgagcgccatcgtgctgaacaaattgcccggcctcgcgacgcagggcgggacg
aagaccgatcaacatgtcgacggcctgctcgatgcgctgaaatatgacgcgccggtgcgc
ccgaagctcgtccaccggctcgacaaggacacgtcgggcgcgctgctgatcgcgcgaagc
ccacgcgccgccgcctggttcgccaagagcttttcgaaccgcagcgcgcgcaagacctat
tgggcgatcgtcgtcggcgtgcccgacatcgcgcagggcgagatcgacctgccgctcgcc
aagcagccgggatcgggcggcgagaagatgcacgtccacgacagcggcctgccggcgaag
acgcgctaccggatcatcgagcgcgcggggaacagcgccgcatgggtcgagctccagccg
ctgaccggccgcacgcaccagctgcgcgtccatatggcggcgatcggccacccgatcgtc
ggcgacggcaaatatggcggcaagggcgcctttctgaccggcacgatcagccgcaagatg
cacctgcacagccgccgcctgcgcatcgaccatcccgacggcggcgcgatcgacatcagc
gccgaggtgcccgagcatttcgccgcgagcctcgacgcgctcggcttcgatccgctgctc
ggcgaagtcggcatcgacgacgtcgccaagggcccgccgcccaaagccgccgcgaaagcc
gcggccaaggcgcacagcaaggcgatccgcaaggcgcggcgcggcgaacgccgcgggcgc
accgcgacgagcaagccgaccgaccatgtcggcaagccgaaacccaagcccgccaaggtc
aaagcaaagcccggcaagcccgcgggccgcaaacccgccgcgaagaaatcgccggcgcgt
cccgcacggccgcgctga
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