Sphingopyxis sp. PAMC25046: E5675_06280 Help Entry E5675_06280       CDS       T06315                                  Name (GenBank) DEAD/DEAH box helicase   KO K11927   ATP-dependent RNA helicase RhlE [EC:5.6.2.7] Organism sphx  Sphingopyxis sp. PAMC25046 Pathway sphx03018   RNA degradation Brite KEGG Orthology (KO) [BR:sphx00001]  09120 Genetic Information Processing   09123 Folding, sorting and degradation    03018 RNA degradation     E5675_06280  09180 Brite Hierarchies   09182 Protein families: genetic information processing    03019 Messenger RNA biogenesis [BR:sphx03019]     E5675_06280 Enzymes [BR:sphx01000]  5. Isomerases   5.6  Isomerases altering macromolecular conformation    5.6.2  Enzymes altering nucleic acid conformation     5.6.2.7  DEAD-box RNA helicase      E5675_06280 Messenger RNA biogenesis [BR:sphx03019]  Prokaryotic type   Bacterial mRNA degradation factors    RNA degradosome components     Helicases      E5675_06280 BRITE hierarchy SSDB OrthologParalogGene clusterGFIT Motif Pfam:  DEAD Helicase_C ResIII UTP25 Helicase_C_2 AAA_19 MerR-DNA-bind ERCC3_RAD25_C CMS1 Motif Other DBs NCBI-ProteinID:  QCB54072 UniProt:  A0A4P7RWA6 LinkDB All DBs Position 1340819..1342228 Genome browser AA seq 469 aa AA seqDB search MTTFNDFGLHADINRALAAKDYTQPTPIQTQAIPPLMKGRDLCGIAQTGTGKTAGFSLPS IHHLLTYPHRANPRSCRMLVLAPTRELAAQIAQSCRDYGRFTKLRVSTVFGGVPINKQIR DLAQGVDILVATPGRLLDLIDQRALRMDDVEIFVLDEADQMMDMGFIHSLRRIAKLLPSR RQNLFFSATMPKEIAGLADQFLNDPVTVSVAPQATTAEKIRQYSTFVEQKEKQALLTAVI GREDIDRALIFTRTKHGADRVVRHLAGAKIKAMAIHGNKSQSQRTQALQAFRSGEIKLLV ATDIAARGIDVSGVSHVINFEIPNVPEQYVHRIGRTARAGAEGKAISFIAPDERTYMRDI ERVTRTKSEPMPLPENFSELVRNLPKPVQPPRDTGSKGRNPQRQREDAHRQRDGGQRDAG NRDGGQPRGDRGPRREGPASGEGQPQRKRRFRPRNKSVGAHKGAVKRVG NT seq 1410 nt NT seq  +upstreamnt  +downstreamnt atgacgacttttaacgactttggcctgcacgccgacatcaatcgcgcgcttgccgccaag gattatacccagcccaccccgatccagacgcaggcgatcccgccgctgatgaagggtcgc gacctgtgcggcatcgcgcagacgggcacgggcaagaccgcgggcttttcgttgccctcg atccatcacctcctgacctatccgcaccgcgccaatccgcgcagctgccggatgctcgtg ctcgcgccaacgcgcgaactcgcggcgcagatcgcgcaaagctgccgggactatggccgc tttaccaagcttcgcgtatcgaccgtgttcggcggcgtgccgatcaacaagcagatccgc gacctcgcgcagggcgtcgacatcctcgtcgccacgccggggcgcctgctcgacctgatc gaccagcgcgcgctacgcatggacgatgtcgaaatcttcgtcctcgacgaagccgaccag atgatggacatgggtttcatccactcgctgcgccgcatcgccaaactgctgccgtcgcgc cgccagaacctgttcttttcggcgacaatgccgaaagagatcgcgggcctcgccgaccag ttcctcaacgatccggttaccgtgtcggtcgccccgcaggcgacgactgccgagaagatc cgccaatattcgaccttcgtcgaacagaaggaaaagcaggcgctgctgactgcggtgatc ggccgcgaggacatcgaccgcgcgcttattttcacccgtaccaagcatggcgccgaccgc gtcgtgcgtcaccttgcgggcgcgaagatcaaggcgatggcgatccacggcaacaagagc cagtcgcagcgcacgcaggcgctgcaggcgtttcgctcgggcgagatcaagctgctcgtc gcgaccgacatcgccgcgcgcggtatcgacgtgtcgggggtgagccatgtgatcaacttc gaaatcccgaatgttcccgaacaatatgtccaccgcatcggccgcaccgcgcgtgccggc gcagaaggcaaggcgatcagcttcatcgcccccgacgagcgcacctatatgcgcgacatc gaacgcgtgacgcgaaccaagtccgaaccgatgccgctgcccgagaatttcagcgaactg gtacgcaacctgcccaagccggtgcagccgccgcgcgataccggtagcaagggacgcaac ccgcagcgccagcgcgaggacgcgcaccgtcagcgggacgggggccaacgcgacgccggg aaccgtgatggcggtcagccgcgcggcgaccgcggcccgcgccgcgagggtccggctagc ggcgaaggccagccccagcgcaagcgccgcttccgcccgaggaacaagagcgtcggcgca cacaagggcgcggtgaagcgcgtcggctaa

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