Sphingorhabdus sp. YGSMI21: CHN51_04950
Help
Entry
CHN51_04950 CDS
T05308
Name
(GenBank) hypothetical protein
Organism
sphy
Sphingorhabdus sp. YGSMI21
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Autotransporter
Trypsin
Motif
Other DBs
NCBI-ProteinID:
ATW02952
UniProt:
A0A2D3RB74
LinkDB
All DBs
Position
complement(1023268..1026732)
Genome browser
AA seq
1154 aa
AA seq
DB search
MIKNFGHSKRSVLLRTAAAGAIATLALASPAKAIVPGQNETSESIVDEDGGVNGVGQMVI
SNGGGSVGLCTGTLINPRTVIFAAHCVNSRPEDAYGSNTGGVPISFGFAVDNFPAILNWF
GSGFSTNTADFLYNVNQVNWNIASAPTGFLEADVALATLDTPAADIPTWAILFSALPDPG
AIDSVTGTGYHVNQTGYGGTGNAVDGAVDGIDFRRRLVENYLGALASLNDLGEPLVGPEP
FGADFPQNLYWADFDSIEDANGNRSVFSDFNWLRDEALPNEGTTAGGDSGGPLVLDAANN
AITSEDLVLGVLSGGAGFLGGSDQLGSASFYQPLFQFWDYIAANNAYHYVTANAGDGDWE
DGSHWTSLLDPNYRIIDESGAIVNGIPTTEPGGVNAVEPDFGAVCIQGPVVGAIGGNVCI
DLSDGEITPTDPAGDDLPAAVMNNGGAAAGSVTVLGDNSATVQLTDGTSPLANNSATVEI
EVAAADDAGATVVSGAANAQFSEPVLESHAEGDPLPAPTIANGLPGATDFVPNNVDPDGL
GAAGAYYDVTLSNAGITTLGSTVEIDRLTVSGAAGLDITADGSLTSLIDVTQAGGMVNID
GSLTSVGDYFLMAGLLSGTGSVNTPFLTNVMGGIAPGTMGTIGTLTVNGNTILSSGSTLL
VDIGASGDSDLLAVNGAADLGGTVVFSPVSGFQTATASNYQILTATDGVTDEFDGAAQIS
AILLSEFSYSANAVDVTISAQSYQNVIAADNAVQVSFAALMDNNRGNTAVADLFTFLDFT
DAGTIQATFDSWAPTTESTVQAMGQSFLGNVSDFYQNRISLAERSSNGGTIAVIGRPMQL
AATSLGGLAMNGASVLSDAAANADDTEVRSGGVNEDMAVYLAGGFVNGDGGSMPLTNPAP
GSDGEDEFDGFFIAGGLEYYLDEASFIGVSAYYSDVDATAALGNTAQSTAIMGSIYGRKK
MSGGLVLDGRATVGTYNAETLRTVSLGTQSFSLTTDDDSMVYAAELGLSKEMEMLDVIAA
PGIRARAAKINFSNVDEQGGGPALTIIRPDYESIQGLAGIEFKSKPGRKLQMRASMNYVH
EFQDNPNSFGANFVGGNGAVAPFALAERDKNWGEVGVGLRYNMGNVSFDLSADSTVGRSD
VSSQLYSGAISFRF
NT seq
3465 nt
NT seq
+upstream
nt +downstream
nt
atgatcaagaatttcggacattccaaaagatcggtacttttgcgtacagcagcagccggc
gcaattgctactctcgcgctggcatcgccggcaaaggccattgtgcctggtcaaaacgaa
accagcgaatccattgtcgatgaagatggtggagtgaatggcgtcggtcagatggtcata
tccaacggtggtggatctgttggcttgtgtaccggaaccctgatcaatcccagaaccgtg
atctttgcggctcactgcgtgaatagccggccggaagatgcatatggctccaataccggc
ggcgttcctattagtttcgggtttgccgttgataattttcctgcaatcctgaactggttt
ggcagtggcttcagcaccaacaccgctgattttctctacaatgtgaatcaggtaaactgg
aatatcgcgtccgcacctaccggttttctggaagccgatgtagcgctggcgacgcttgac
acaccagcggcggatattccgacctgggctattctgttttccgcattgcctgatccaggc
gcaatcgattcggtaaccggcaccggatatcatgttaatcagaccggctatggcggaacc
ggtaatgcagttgatggcgctgtcgatggcattgattttcgtcggcgcctggtcgaaaac
tatttgggtgccctagcatcgctgaacgatttgggagagccactggttggtcctgagccc
ttcggagccgatttcccacaaaatctctactgggccgactttgacagcatagaagatgcc
aatggaaatcgttcggttttctcggatttcaactggttacgcgatgaggcattgccaaac
gagggaacaaccgccggcggcgattcaggcggtccgcttgttctggatgcagccaataat
gcaataaccagcgaagatctggtactgggcgtattgtccggcggcgcgggttttttagga
ggttccgaccagctcggttcggccagcttctatcagcctctgttccaattctgggactat
atcgcggccaataacgcctatcactacgtaaccgcaaatgctggtgatggcgattgggaa
gatggaagccactggaccagtctgcttgatcccaactaccgtatcattgatgagagtggt
gccattgtaaatggtatcccgacgacagaaccgggcggcgtaaatgctgtggaaccggat
tttggcgcagtgtgtattcaaggaccggttgtcggtgcgattggcgggaatgtctgtatt
gatctgagcgacggtgaaatcactccgaccgatcccgctggtgatgatttaccagccgct
gtgatgaacaacggcggtgcggccgctggctctgttaccgttttgggcgataacagtgcg
acggtgcagttgacggatggcacctctccgctggccaataacagtgcgactgtcgaaatt
gaagtagctgctgcggacgatgccggtgcaaccgttgtttccggagcggccaatgcgcaa
ttcagcgaaccggttctggaaagccatgcggaaggcgatccgctgccagcgccgacaatt
gctaacggattgcctggcgcaaccgatttcgtgccaaataatgtcgatccggatggcttg
ggagccgctggcgcttattatgatgtcacgctgagcaatgcgggcatcaccactctgggc
agcacggttgagattgaccgcctgactgtttctggcgctgccgggcttgatattaccgca
gacggaagcttgaccagccttatcgatgttactcaggccgggggcatggtaaatatcgat
ggttctctgacatctgtcggcgactatttcctgatggcaggtctgctgtccggtaccggc
tcggtgaacacgccattcctgacaaatgtgatgggtggaattgcaccgggcacgatgggg
acgatcggaacattgacggtcaatggcaacaccatcctgtcttccggctccacgctgctg
gttgatattggcgcatcgggtgattccgatcttctcgcagtcaatggtgctgctgattta
ggcggtactgtcgtgttctcgccggtcagtggtttccagactgcaacagccagcaattac
cagattctcactgcgaccgatggcgttacggatgagttcgatggcgcggcgcaaatttcg
gcgattctgctttccgaattcagctatagcgcaaatgctgtcgacgtaaccatcagcgcg
caaagctatcagaatgtgatcgctgcagataatgcggttcaggtcagctttgctgctctg
atggacaacaaccgtggcaacacggctgttgcagatctgttcaccttcctcgactttacc
gatgccggtaccatccaggcgacgtttgacagctgggcgccgacaacggaatctactgtt
caggccatgggtcagtctttcctcggcaatgtctctgatttctaccagaacagaatcagt
ctggccgagcggtcctccaatggcggtaccatcgctgtaatcggtcgtccgatgcagctg
gcggccacgtcactgggcgggctggcaatgaacggcgcaagcgtcctgagtgacgctgcc
gcgaatgcggacgataccgaagtgcgttccggtggtgtcaacgaagacatggccgtctat
ctcgccggtggttttgtgaacggggatggcggttccatgcctctcaccaatcccgctccg
ggatccgacggagaagacgagtttgacggcttcttcattgccggtggtctcgaatattat
ctcgacgaagcctccttcatcggcgtctcggcatattattcggatgtggatgcgacggct
gcccttggcaatacggcgcaatcgacagcgatcatgggttcgatctacggtcggaagaaa
atgtcaggcggtctggttctggatggccgggcgacggtcggtacctataatgcagagacg
ctgcgtaccgtttcgcttggtacccaatccttcagcctcaccaccgatgacgacagcatg
gtctatgctgctgaactcggcttgtcgaaagagatggaaatgctcgacgtgatcgccgct
cccggaattcgggcacgcgcggccaagatcaacttcagcaatgtcgacgaacagggcggt
ggaccggctttgacgatcatccgtcccgactatgagagcatccagggcctcgcgggtatc
gagttcaagtccaagccgggccggaaattgcagatgcgcgcgtcgatgaattatgtccat
gaattccaggacaacccgaacagcttcggtgcaaattttgtcggtggcaatggtgctgtg
gctccattcgcactggctgaacgcgacaagaactggggcgaagttggcgtcgggctgcgg
tacaatatgggcaatgtctcgtttgacctctccgccgattcaacggtcggccggtcagat
gtgtccagccagctgtattcgggcgcgatcagcttccgcttctaa
DBGET
integrated database retrieval system
