Sphingorhabdus sp. YGSMI21: CHN51_08070
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Entry
CHN51_08070 CDS
T05308
Name
(GenBank) ATP-dependent DNA ligase
Organism
sphy
Sphingorhabdus sp. YGSMI21
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Gene cluster
GFIT
Motif
Pfam:
DNA_ligase_A_M
DNA_ligase_A_C
DNA_ligase_A_N
Motif
Other DBs
NCBI-ProteinID:
ATW03496
UniProt:
A0A2D3RCQ7
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Position
1662464..1664035
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AA seq
523 aa
AA seq
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MRRFAALIDSLIYTRSRNAKLAAISTYLRETPDPDRGWALAALTDSLDFPAVKSATIRNL
AGTRIDPELFRLSRHHVGDTAETVALVWPEADGREQSDPSIDEVVQALSAANRATAPDIV
ASLLDSLDSNSRYALLKLAVGGMRVGVSARLAKTAFAQAFDVALDDVEELWHALDPPYEA
LFQWAEQGGDRPDLSATPFFRPFMLSHPFEGDSLDLDQYAVEWKWDGIRVQAVHLGGETR
LYSRGGDDISASFPDIVEAFDRDGVIDGELLVRGTDQGGEAASFNALQKRLGRKTVSKKM
RQEFPAFVRVYDLLMDGDDDLRLSPWHERRHRLESFVPKLNADHFDLSAVVDVDDFTALE
AMRAGARDAAIEGVMLKRRESPYLAGRVTGHWYKWKRDPLNADCVMMYAQRGNGRRASFY
SDYTFGCWTEDGELLPVGKAYSGFTDEELKWLDRFVRQNTLNRFGPVREVKKSLVLEVAF
DSIHESGRHKSGLAMRFPRIHRIRKDKPAEEADRIATLQGMIS
NT seq
1572 nt
NT seq
+upstream
nt +downstream
nt
atgcgccgctttgccgccctgatcgacagcctgatctacacaagatcgcgcaacgccaag
ctggcggcgatctctacctatttgcgcgaaacgcccgatcccgatcgcggctgggcgctg
gcggcgctgaccgacagcctcgactttccggcggtgaagtccgcgacgatccgcaatctc
gcggggacgcggattgaccccgaactgttccgcctgtcgcgccatcatgtcggtgatacc
gccgagaccgtggcgctggtctggcccgaagcggacgggcgggaacagagcgacccgagc
atcgacgaagtggtgcaggcgctgtccgctgccaatcgtgcgaccgctcccgacattgtt
gcctctttgctcgacagcctggatagcaacagtcgctatgcgctgctcaagctggcggtt
ggcgggatgcgggtcggtgtctcggcgcggctggccaagaccgctttcgcgcaggccttt
gatgtggcgcttgatgatgtcgaagagctctggcacgcgctcgatccgccttatgaggcg
ctttttcaatgggcggagcagggcggtgaccgccccgatctttcggcgacaccgttcttt
cgaccgttcatgctgtcgcacccgttcgagggcgacagtctcgatctcgaccaatatgcg
gtcgagtggaaatgggacggcattcgcgtgcaggcggtgcatttgggtggcgagacccgg
ctctacagccgcggcggcgatgatatcagcgcctccttccccgacattgtcgaggccttc
gaccgcgacggggtgatcgatggcgaactgctggtccgcggcaccgatcagggcggcgag
gcggccagtttcaatgccttgcagaaaaggctgggtcgcaagacggtctcgaaaaagatg
cggcaggaatttcctgcctttgtccgggtctatgatctactgatggacggggatgacgat
ctgcggctgtcgccctggcacgaacggcgccatcggctcgaaagcttcgttcccaaactc
aacgcggaccatttcgatctgtccgccgtggtcgatgtcgatgatttcaccgcgctggaa
gcgatgcgcgccggggctcgcgacgcggcgattgagggcgtcatgctgaagcggcgcgaa
agcccctatctcgccggccgtgtcaccggtcactggtacaaatggaaacgcgacccgctc
aacgccgactgcgtgatgatgtatgcccagcgcggcaacgggcggcgggcgtccttctat
tccgattatacattcggttgctggaccgaggacggcgaactgttgccggtcggcaaggcc
tattccggtttcaccgatgaggaactgaaatggctcgaccgtttcgtccggcagaatact
ttgaaccgcttcggcccggtccgcgaggtgaagaagtcgctggtcttggaagtggccttc
gattccatccacgaaagcggccgccacaaatccggcctcgccatgcgcttcccgcgcatc
caccgcatccgcaaggacaagccggcggaagaggcggaccggatcgcgacattgcagggg
atgatttcgtga
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