Staphylococcus piscifermentans: SAMEA4384060_2522
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Entry
SAMEA4384060_2522 CDS
T06938
Symbol
gidA
Name
(GenBank) tRNA uridine 5-carboxymethylaminomethyl modification enzyme GidA
KO
K03495
tRNA uridine 5-carboxymethylaminomethyl modification enzyme
Organism
spic
Staphylococcus piscifermentans
Brite
KEGG Orthology (KO) [BR:
spic00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
spic03016
]
SAMEA4384060_2522 (gidA)
03036 Chromosome and associated proteins [BR:
spic03036
]
SAMEA4384060_2522 (gidA)
Transfer RNA biogenesis [BR:
spic03016
]
Eukaryotic type
tRNA modification factors
Other tRNA modification factors
SAMEA4384060_2522 (gidA)
Prokaryotic type
SAMEA4384060_2522 (gidA)
Chromosome and associated proteins [BR:
spic03036
]
Prokaryotic type
Chromosome partitioning proteins
Other chromosome partitioning proteins
SAMEA4384060_2522 (gidA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
GIDA
GIDA_C_1st
GIDA_C
FAD_oxidored
FAD_binding_2
Pyr_redox_2
HI0933_like
Thi4
Motif
Other DBs
NCBI-ProteinID:
SNV10083
LinkDB
All DBs
Position
1:complement(2608599..2610473)
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AA seq
624 aa
AA seq
DB search
MSLDYDVIVIGAGHAGIEAGLASARRGAKTLMLTINLDNVGFMPCNPSVGGPAKGIVVRE
IDALGGQMAKTIDRTHIQMRMLNTGKGPAVRALRAQADKVLYQKEMKRVLEDEENLHLMQ
GMVDDLIIEDDEIKGVRTNIGTEYRAQAVVITTGTFLRGEIILGNLKYSSGPNHQLPSVT
LADNLRELGFDIVRFKTGTPPRVNAKTIDYSKTEIQPGDDVGRAFSFDTTEYILDQLPCW
LTYTNAKTHQVIDDNLHLSAMYSGMIKGTGPRYCPSIEDKYVRFNDKPRHQLFLEPEGRD
TNEVYVQGLSTSLPEHVQREMLQTIEGLEKADMMRAGYAIEYDAIVPTQLWPTLETKKIK
NLYTAGQINGTSGYEEAAGQGIMAGINAAGRVLGENEVVLSRSDAYIGVLIDDLVTKGTN
EPYRLLTSRAEYRLLLRHDNADLRLTDLGHEIGLISDERYARFNAKRDQIEAEKERLANV
RIKPNEHTQEVIKAHNGSPLKDGILAIELLRRPEMDYQAILDILEEEHQISADVEEQVEI
QTKYEGYINKSLQQVEKVKRMEQKKIPHDLDYSKIDSLASEAREKLAEVKPLNIAQASRI
SGVNPADISILLVYLEQGKLERVK
NT seq
1875 nt
NT seq
+upstream
nt +downstream
nt
atgagtttggattatgatgtaattgtcatcggtgctggacatgcaggaattgaagcaggt
ttagcttctgcaagacgtggcgctaaaactttaatgctgacaattaatttagataatgtt
ggatttatgccatgtaacccatcagtaggcggaccagccaaaggaattgtagtacgtgaa
attgatgcacttggcggtcaaatggctaaaacaatagatagaacacatattcaaatgcgt
atgttgaacacaggtaaaggtcctgctgtgcgtgcattgagagcacaagctgataaagtg
ttataccaaaaagaaatgaaacgcgtattagaagatgaagagaacttgcatctgatgcaa
ggtatggtagacgatttaatcattgaagatgatgaaattaaaggtgtgcgtacgaatatc
ggtacagaataccgcgcacaagcagtggttattactactggtacgttcttacgcggagaa
attattttaggaaacttgaaatattcaagcggccctaaccatcaattaccatctgttact
ttagcagataacttacgcgaacttggatttgacattgtacgtttcaaaactggaacacca
ccacgtgtgaatgctaaaacgattgattacagcaaaacagaaattcaaccaggcgatgat
gtaggtcgtgcattcagcttcgacacaactgaatatatcttagatcaacttccatgctgg
ttgacttatacgaatgctaaaacacaccaagtaattgatgataatttacatttatctgca
atgtactcaggtatgattaaaggcactggtccacgttattgcccttctattgaagataaa
tatgtacgttttaacgataaaccacgtcatcagttattcttagaacctgaaggccgcgac
actaatgaagtttatgtccaaggcttatcaacaagcttgcctgaacatgtacaacgtgaa
atgcttcaaactatagaaggtttagaaaaagcagatatgatgcgtgcaggctatgccatt
gaatatgacgcgattgtaccgactcaactatggccgacattagaaactaagaaaattaaa
aacttatatacggctggtcaaattaacggtacttcaggttatgaagaagcggctggtcaa
ggtattatggctggtattaatgctgccggcagggtgctcggagaaaacgaagtagtctta
agtcgttcagatgcatatatcggcgtactgattgatgaccttgttactaaaggtacaaac
gaaccttatcgtttattaacttcacgtgccgaatatcgcttattattgcgtcatgacaat
gccgacttacgtttaactgacttaggtcatgaaattggtttgatttcagatgaacgttac
gcacgtttcaatgcgaaacgagatcaaattgaagcggaaaaagaacgcttagctaacgtt
cgtattaaacctaatgagcatacacaagaagtcattaaagctcataacggttcaccactt
aaagacggcatcctagcaattgaattattacgccgtccagaaatggattatcaagccatt
ttagatatcttagaagaagaacaccaaatttctgcagatgtggaagaacaagtagaaatt
caaacgaaatacgaaggttatatcaataaatcattgcaacaagttgaaaaagtaaaacgt
atggaacagaaaaaaattccgcatgatttggactatagtaaaattgacagcttagcaagt
gaagcaagagaaaaattagctgaagtcaaaccattgaatattgcacaagcttcacgtatt
tcaggtgttaatcctgctgatatttcaattttacttgtatatttagaacaaggaaaactt
gaaagggtgaaatag
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