Spirosoma sp. KCTC 42546: EXU85_03260
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Entry
EXU85_03260 CDS
T06164
Name
(GenBank) UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase
KO
K01928
UDP-N-acetylmuramoyl-L-alanyl-D-glutamate--2,6-diaminopimelate ligase [EC:
6.3.2.13
]
Organism
spik
Spirosoma sp. KCTC 42546
Pathway
spik00300
Lysine biosynthesis
spik00550
Peptidoglycan biosynthesis
spik01100
Metabolic pathways
Brite
KEGG Orthology (KO) [BR:
spik00001
]
09100 Metabolism
09105 Amino acid metabolism
00300 Lysine biosynthesis
EXU85_03260
09107 Glycan biosynthesis and metabolism
00550 Peptidoglycan biosynthesis
EXU85_03260
09180 Brite Hierarchies
09181 Protein families: metabolism
01011 Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
EXU85_03260
Enzymes [BR:
spik01000
]
6. Ligases
6.3 Forming carbon-nitrogen bonds
6.3.2 Acid-D-amino-acid ligases (peptide synthases)
6.3.2.13 UDP-N-acetylmuramoyl-L-alanyl-D-glutamate---2,6-diaminopimelate ligase
EXU85_03260
Peptidoglycan biosynthesis and degradation proteins [BR:
spik01011
]
Precursor biosynthesis
Amino acid ligase
EXU85_03260
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Mur_ligase_M
Mur_ligase_C
Mur_ligase
HTH_micro
Motif
Other DBs
NCBI-ProteinID:
QDK77662
UniProt:
A0A514ZSU6
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Position
complement(741246..742724)
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AA seq
492 aa
AA seq
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MQLKDLFYKTPLLATSGSMTTEITNLTMDSRKVGPSSLFIAIRGTLTDGHSFIETAIRQG
AAAILCEELPAEINSSVAYVQVQDSARTMGLAAANFYDHPSQKLKLVGVTGTNGKTSVAT
LLFRLFRGLGYRCGLLSTVQNQIDDEVIPATHTTPDAITTNQLLTKMRTHGCTHVFMEVS
SHAVVQERIAGLTFAGGIFTNITHDHLDFHGTFDNYIRAKKGFFDQLPSSAFALTNVDDK
RGLVMLQNTAARKETYSLQTLATFKGKLLADSLFGLHMLVDAREVWFKLIGRFNAYNLLS
VYGAAVLLGEEPTDVLTLLSGITPPRGRFEQVVSDNKIVGIVDYAHTPDALQNVLETING
LRQTDEQGRLPQIITIVGCGGNRDAAKRPIMAGIACKFSTRVILTSDNPRNEDPIAILEQ
MQAGVPPVDVKKTQTIEDRHEAIRQAVSIAYPHDIILVAGKGHETYQEIKGIKYDFDDKA
VLQEAFAERGNQ
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
atgcaactcaaagacctcttctataaaactcctctgctggctacatccggcagcatgact
actgagattacaaatctgacgatggactcgcgtaaagtgggtccaagcagtttgtttata
gccattcgtggcacccttactgatggccatagctttattgaaacggccattcgccaggga
gcagccgctatcttatgcgaagagctgcccgctgagattaactcctctgtggcctatgta
caggtgcaggactcggcccggacaatgggattagcagctgctaatttttacgatcatccc
tcccaaaagctcaaactagttggtgtaacagggaccaatggcaagacatccgttgcaacc
ctactcttccgactgtttcgcggcttaggctatcggtgtgggttgttatctacggttcag
aaccagattgatgatgaagtaattccggcaacacataccacacccgacgccatcaccacc
aatcagctactgacaaaaatgcgtacccatggctgtacgcatgtatttatggaagttagt
tcacatgcggttgtgcaggaacgtattgcaggcctgacgtttgccggtggtatttttacg
aacatcacccacgatcacctcgattttcacgggactttcgataactacatccgggcaaaa
aaaggattcttcgaccagcttccgtcatccgcctttgccttaacgaacgttgacgataaa
cggggtctggtgatgcttcagaataccgctgcacgcaaagaaacctactcattacaaaca
ctggctacgtttaaaggtaaactcctggccgatagtctgtttggactgcacatgctggtc
gatgcgcgcgaggtatggtttaaacttattggccgttttaatgcctataatctgttaagc
gtgtatggagcggccgttttgttaggtgaggagccaactgatgtattaaccttactatct
ggcattactccaccgcggggtcgatttgaacaggttgtttcagacaacaaaattgtggga
attgtcgattatgcccacacgcctgatgcgctgcaaaacgtattggaaaccatcaacggt
ctgcgccagacagacgaacagggtcgcctgccgcaaatcattacgattgttggctgtggg
ggaaatcgtgatgcagccaaacggcctattatggccggtattgcgtgtaaattcagtacc
cgcgtcatcttgacttcagacaatccgcgcaacgaagacccgatagccattttagagcaa
atgcaagctggtgttccccccgttgatgtaaagaaaacgcaaacaattgaggatcggcac
gaagcaatacgtcaagcggtttcaattgcgtatccgcacgatattattctggttgctggt
aaaggccacgaaacctatcaggaaatcaaaggcatcaaatacgactttgatgataaggcc
gtgttacaggaggcttttgcagaacgcggaaatcagtaa
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