KEGG   Spirosoma sp. KCTC 42546: EXU85_04395
Entry
EXU85_04395       CDS       T06164                                 
Name
(GenBank) RNA polymerase sigma-70 factor
  KO
K23514  RNA polymerase sigma-19 factor, ECF subfamily
Organism
spik  Spirosoma sp. KCTC 42546
Pathway
spik02020  Two-component system
Brite
KEGG Orthology (KO) [BR:spik00001]
 09130 Environmental Information Processing
  09132 Signal transduction
   02020 Two-component system
    EXU85_04395
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:spik03021]
    EXU85_04395
Transcription machinery [BR:spik03021]
 Prokaryotic type
  Bacterial type
   RNA polymerase
    Sigma factors
     EXU85_04395
SSDB
Motif
Pfam: Sigma70_r4_2 Sigma70_r2 Sigma70_r4 Sigma70_ECF HTH_24 HTH_40 GerE HTH_38 HTH_Mga HTH_5 HTH_30 HTH_DeoR HTH_11 HTH_10 HTH_AsnC-type TetR_N HTH_23 HTH_17 HTH_28 LexA_DNA_bind ASFV_360 HTH_Tnp_ISL3
Other DBs
NCBI-ProteinID: QDK77869
UniProt: A0A514ZTF6
LinkDB
Position
1043827..1044402
AA seq 191 aa
MSLHLLTDNELLALLREDDEQAFRELYDRYWYKMYVIAHRKLRRKEVAEELAQELFVMIW
QKRESLRVINLQAFLGVSLKNLMIDYIRRNIQEEHYLDQLQQFFPAETFATIEAVQMNEL
SEAIQSTLAKLPEKTREIFILNRFEHLTIREIAQRLNLSEKTIEYHLSRSTTFLRQNLRD
FMTVWVLLLIS
NT seq 576 nt   +upstreamnt  +downstreamnt
atgtccctgcacttgttaaccgacaatgagttgttggccctgcttcgagaagacgacgag
caggcgttcagggagttatatgatcgatactggtataaaatgtacgtaattgctcatcgt
aaacttcggcggaaagaagtggctgaagagttggcgcaggagctttttgtaatgatctgg
cagaaacgggaatccctgcgggtcattaatttacaggcgtttttaggggtgtcgctcaag
aatctgatgatcgactacatccgccgaaatattcaggaggagcattacctcgatcaactt
cagcagtttttccccgccgaaacctttgccactatagaggccgtacagatgaatgaactc
tccgaagcgattcagagtacattggccaaacttcccgaaaaaacccgggaaattttcatt
ctcaaccggttcgaacaccttaccattcgggaaattgcccagcgactgaacctgtccgaa
aaaacaatagaataccacctttcccggtcaaccacctttctacgtcagaatctacgcgat
ttcatgaccgtctgggtgctgttattaatctcctga

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