Spirosoma sp. KCTC 42546: EXU85_34055
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Entry
EXU85_34055 CDS
T06164
Name
(GenBank) helicase SNF2
Organism
spik
Spirosoma sp. KCTC 42546
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Paralog
Gene cluster
GFIT
Motif
Pfam:
SNF2-rel_dom
DUF3670
Helicase_C
ResIII
SWIM
AAA_22
ERCC3_RAD25_C
Motif
Other DBs
NCBI-ProteinID:
QDK83360
UniProt:
A0A515A945
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Position
8371842..8375390
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AA seq
1182 aa
AA seq
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MAERITYGKTWWGQQWLNALTSIDMANRIPRGKTYANQGAVMGLLISNNQISASIKGSAP
RPYKTKLSVPLFTDQEKDWLLTEIRENPAILAQLLNRQLPQELTEFANRRGIKLFPKSFQ
DLTMGCSCPDFAVPCKHLAAVIYIIANEIDRNPFLVFQLKGLDILEELQKDQANTIGGNM
GAVFSFKEICTDEFPDDEDWVPDEKARASLDFAAIPSLSDQLLGLLSPDVTFTKGDFHKS
LAKAYKLFSKPISDIKPFSQEERPNFSDSIELQLDEVMSVKKISMFSEHGEQRSLSGFTL
SDLISWLDTLTEADWPEMSDSVRSLYLTHQFSAALLRRGAIVPQLLRVGPAEEHYRVRWI
PATLNEAVKQVTDRLNTQIPPTLLTVRWQKEWLALPGEQLTLTLCSLFLRKVIKPTTIEL
WERWPLEDADRLFFGIETLRFEGFGRKEMPLAMQLWLNDFFLTHKRFVPILAVEENEYGD
EFRMSLLIRDRDATDTGGTPAAPIPLPDLLAKKKHAPIRMAVLQDLLVLSRHFPDLAKLT
RLGGGAYLAYSPSEFVQVLLDTLPRMQLLGIALWLPKSLQHWVRPQVGARLKAKVTADDA
FMRLDDMLTFDWQVALGDEMVSVSEFQKLVGRTTGLVKIKDQYVLIDPNELTKLYKQLEN
PPELTGSDLLKAALSEEYRGGRLGISPEVRKLVKQFTESAAQPLPDALHATLRPYQHRGY
DWLVKNTALGMGSLLADDMGLGKTLQIIALLLKFKQEGRFKKQKGLVVLPTTLLTNWQKE
IARFAPDLQAQVYHGSSRKLPTADDTYDLLLTTYGVIRSDLDKLKKTTWAVVVIDEAQNI
KNSDTEQTKAVKALKAPIRIALSGTPVENRLSEFWSIMDFVNKGYLGGLSKFNEEFGKPI
QQERDHQKLDQFRRITSPFLLRRVKTDRSIISDLPDKIENNQFCALTTEQAALYQSVVQE
SLRAIEEKDGIARRGLVLKLMTALKQIGNHPQQYLKKSNSKDGGPSPALSGKATLLLSLL
ETIYANHEKVLIFTQYREMGELLSQFIQQTFGQQPLFLHGGTSRPDRDQMVEQFQKNRSD
HTFILSLKAGGTGLNLTQANHVIHYDLWWNPAVESQATDRAFRIGQTKNVWVYRLMNQGT
LEEKIDAMIRSKRELADLSVKTGETWLGDLSDTELKELVSLG
NT seq
3549 nt
NT seq
+upstream
nt +downstream
nt
atggcagaacgcatcacctacggcaaaacatggtggggccagcagtggctaaacgccctg
acaagcatcgacatggcgaaccgcattccacgcggaaaaacctatgccaatcagggtgcc
gtaatgggattactgatttccaataatcagattagtgcctctattaaaggatcggctcca
cggccgtataaaaccaagctatcggtacccctttttacggatcaggaaaaagactggctt
ctgaccgaaattcgggaaaatccggccatactggcgcaactgttgaaccgccagctcccg
caggaattgaccgaatttgccaatcggcggggcatcaagctatttccgaagtcctttcag
gatttgacgatgggttgctcctgccctgacttcgccgtgccgtgcaagcacctggcggcc
gttatttatatcattgccaacgaaattgacagaaatcctttcctggttttccagctaaaa
ggcctggatattctggaagaactccagaaagatcaggccaacacgatcggtgggaacatg
ggggccgttttttcgttcaaagaaatctgtaccgacgagttcccggatgatgaagattgg
gtacctgacgaaaaagcgcgggccagcctggattttgctgccattccatccttatcggac
caactactgggtctgctttcgcccgatgtaacgtttaccaaaggtgacttccataaatcg
ctggccaaagcgtacaagttattcagtaagcctatatccgatataaaaccgttctcgcag
gaagagcggcccaacttcagcgacagcatcgagctacaactcgatgaagttatgtcggtg
aagaaaatcagtatgtttagtgagcatggcgaacaacgatcgctcagcggcttcacctta
agcgacctgattagctggctcgatacgctcaccgaagccgactggcctgaaatgagcgat
tcggttcgatcgttgtacctgactcatcagttctcagcggctctgcttcgccggggagca
atcgtaccccaattgctgcgggtcgggccagccgaagaacactaccgggtacggtggatt
ccggcgacactgaacgaagccgttaaacaggtaaccgaccgactgaacacgcaaattccg
ccaacactgctgacggttcgctggcagaaagaatggctggcgctacccggcgagcaactg
actctgacactctgctcgctgtttttgcgtaaggttatcaaaccaacaaccattgaactt
tgggaacgatggcccctcgaagacgccgatcgattgttttttggtatcgaaaccttacga
tttgaagggtttggtcggaaagagatgccattggcgatgcagctatggctaaacgatttt
ttcctaacccacaagcgattcgtaccaattctggccgttgaggaaaatgaatacggcgat
gagtttcggatgagtctgcttattcgcgaccgcgacgccactgatacgggaggaacgccc
gcagcccccatacctttaccagacttattagccaaaaagaaacacgcacccattcggatg
gcggttttgcaggatttgctggtgctatcccggcactttcctgatttagccaagttgacc
cggttgggtgggggcgcttacctcgcctactccccttctgaatttgtccaggttttgctc
gatacgctgccgcgcatgcagttgctgggcattgcgctctggctaccgaagtcacttcaa
cactgggttcgtccgcaggtaggagcacgattgaaagcgaaagtcacagccgatgacgcc
ttcatgcgcctggacgatatgctgaccttcgattggcaggttgcccttggtgatgagatg
gtaagcgtgagtgaatttcagaaattagtcggtcgcacaacgggcttggtcaagatcaaa
gatcagtacgtattgattgacccaaatgagctaaccaaactttataaacaactcgaaaac
ccgcccgaacttacaggttcagacttgctcaaagcggctttatcggaagaatacagaggt
gggcgcctgggcatttcgcccgaggttcggaaactggtcaaacagtttaccgaaagtgct
gcccagcccctgcccgatgcgttacatgccaccctacggccctatcagcatcggggttat
gattggcttgtcaagaatacagccctcggtatgggaagcctgttggctgatgatatggga
ctaggtaaaaccctgcaaatcatcgctctacttctaaagtttaaacaggaaggccgattt
aagaaacaaaaggggctggttgttttaccaactacattgctgacgaactggcaaaaagaa
atagcccggtttgcccccgacttacaggctcaggtttatcatggttcgagtcgtaaactc
ccaaccgccgacgatacgtatgatttacttctgacgacttacggcgtgattcggagcgat
ctcgataagctcaagaaaacgacctgggcagtagtcgttatcgacgaagctcagaacatt
aaaaactccgataccgagcagacaaaagccgttaaagcattaaaagcaccaattcggatt
gcgctcagcggtacgcctgttgagaaccgattgtcggagttctggagtattatggacttc
gtaaacaaggggtatctgggcggtttgagcaaattcaacgaggagtttggcaagcccatt
cagcaggagcgcgaccaccagaaactcgatcaattccggcgaatcacgagtccgttttta
ctccggcgcgttaaaactgaccgaagcatcatcagcgacctccccgataaaatcgagaac
aatcaattctgtgccctcactacagaacaagctgctctataccaaagtgttgttcaggaa
agcttacgagccattgaggaaaaagacggcatcgctcgtcggggtctggttctgaaacta
atgactgcactcaagcagatcggcaaccacccgcaacaatatctgaagaagagcaacagc
aaagatggcggtccttcacctgctctttccggcaaggccaccttgctactcagtctgctc
gaaacgatttatgccaaccacgagaaagtgctgattttcacgcaataccgtgaaatgggt
gaattactatcccaatttatccagcagacattcggtcagcaaccgctgtttctgcatggt
ggcacctcccgccctgaccgcgaccagatggttgaacagtttcagaagaatcgcagcgac
cacacgtttattctgtcgcttaaagccggtggtactggcctgaacctaacccaggccaac
cacgtcattcactatgatttatggtggaatccggctgtcgaatcgcaagccaccgaccgg
gccttccgcatcggtcaaacgaagaacgtatgggtgtatcggcttatgaaccagggtaca
ctcgaagaaaaaatcgacgccatgatccgctccaaacgcgaactagccgacctcagcgtc
aaaaccggcgaaacctggctgggcgatttgagtgatacggagttgaaagagctggtgagt
ttggggtaa
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