Skermania piniformis: KV203_10580
Help
Entry
KV203_10580 CDS
T07358
Name
(GenBank) UvrD-helicase domain-containing protein
KO
K03582
exodeoxyribonuclease V beta subunit [EC:
3.1.11.5
]
Organism
spin
Skermania piniformis
Pathway
spin03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
spin00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
KV203_10580
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
spin03400
]
KV203_10580
Enzymes [BR:
spin01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
KV203_10580
DNA repair and recombination proteins [BR:
spin03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
KV203_10580
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UvrD-helicase
AAA_19
UvrD_C
UvrD_C_2
AAA_30
PDDEXK_1
PaaA2
Motif
Other DBs
NCBI-ProteinID:
QXQ12440
LinkDB
All DBs
Position
complement(2277204..2280692)
Genome browser
AA seq
1162 aa
AA seq
DB search
MGAVTTGSRLPDRRGRPVRRAGDDAVAAVARRRDDGPAVTAAETVIAAAPATVGRTFDPA
GPLPRGTTVLEASAGTGKTYAIVGLAARFVAEGVAEIGDLLLVTFGRHATRELRDRARAR
FTTVAAALADPRAAAAHDDAVVRVLAAGAPAEVALRRRRLRRALADFDAGTITTTHGFCQ
RMLDGLGIWAEREPDARLVEDVLELIDEVTDDEYLRRYGRWDGPPPLSRDDAGAVARAAV
VDRQARLVPDAEAGSAPDSAAAHRVGFATAVRAEVQRRKRLLGIRDFDDLLVLLRDALAD
PVHGAAAAARIRDRYRVVLVDEFQDSDPVQWEILRRAFHGHVPLVLVGDPKQAIYAFRGA
EVLSYLDAVQVAGAHLELDTNRRSDAGLVRALSHIYGGAALGHPAIVVSDVAAVHPGSRL
SGAIPVRLRVLPRAGLGPRNKSGFPAVGRVRDGVAADLAADLVRLLADPPLLHDEAGSRP
LGPGDIAVLVRTRNQLATVRAALDRVGLASVLAGGSSVFGTTSAVAWLHLLQALEQPHRG
DRVRLAALGPLLGWTVSELDVRGPDAVAEIGSRLREYAALLLGSGFAAMFERLAEQARLA
ERLLALDGGERELTDLRHLAQLLDRVMVDDHRGPTELVRWLSDRIAEPATGGPADRSRRL
DRDAAAIQLATVHASKGLEFPVVYLPFGWDTGRNPYPATLLLHDERGDRLLDVGDESAPG
YRERRRRHEAEQAGEELRLLYVGLTRARCQVVIWWAPAFTTAESPLHRLILGRAPGSATV
PGRARVPADAAVGADLDAWAEPVADVLAVEQVRDAPPDHGRRRTATADLEPLEVARFRRR
LDLDWRRTSYSALTVDRHAAPAGGPGGAGVRSEAEDPGRDDEPADDASTPVGADTVRAGA
LASPMSDLPAGPLFGVLVHEVLETVDTGAADLRAEVRRRCTASIESRLAEVDPDLLTDAL
GHVLATPLPDGVTLAAIAPRDRLTELDFELPLAGGADPVAAAATAPEIAALLRRHLATDD
PLIEYPDRLAELAADPLRGYLTGSIDAVLRLPGPRFAIVDYKTNRLAAGPLTVDHYRPDR
MAAEMVRADYPLQALLYSVALHRYLRWRLPGYHPHAHLAGVRYLFVRGMAGPATPAGCGV
FDWRPSPELIVALSDRLAGGSA
NT seq
3489 nt
NT seq
+upstream
nt +downstream
nt
atgggtgcagttaccaccggatcccggctacccgaccgacgaggcaggccggttcggcgc
gctggcgacgacgctgtggctgccgttgctcgccgccgagacgatgggccggccgtgacc
gctgcagaaacggtgatcgcggcagcgccggcgaccgtcggccggacgttcgacccggcc
ggcccgctgccgcgcggcaccaccgtgctggaagccagcgcgggcaccggcaagacctac
gcgatcgtcgggctggcagcacgattcgtcgccgagggcgtcgccgagatcggcgacctg
ctgttggtcaccttcggccggcacgccacccgggaactgcgcgaccgcgcgcgcgcccga
ttcaccacggtcgcggcagcgctcgccgatccgcgggcggcggccgcgcacgacgatgcc
gtggtgcgggtgcttgccgccggggcaccggccgaggtggcgctgcgccggcgacggctg
cgccgggcactggccgacttcgacgccggcaccatcaccaccacccacggcttctgtcag
cggatgctggacgggctcgggatctgggccgaacgcgagccggacgcccggctggtcgag
gacgtgctggagctgatcgacgaggtgaccgacgacgagtacctgcggcggtacggccgg
tgggacgggccaccgccgttgtcgcgcgacgacgccggggcggtcgcgcgcgccgcggtg
gtcgatcggcaggcccggctcgtgccggacgccgaagccgggtcggcacccgattcggct
gcggcgcatcgggtcggcttcgccaccgccgtccgcgccgaggtgcagcggcgtaagcgt
ctgctgggtatccgcgatttcgacgacctgctcgtgctgctgcgcgacgcgctcgccgac
ccggtgcacggtgcggcggccgccgcgcggatccgtgaccggtatcgagtcgtgctggtc
gacgagttccaggacagcgatccggtgcaatgggagatcctgcgccgcgcgttccacggc
cacgtgccgctggtgctggtcggcgatccgaagcaggcgatctacgccttccggggtgcc
gaggtactcagttatctggacgcagtgcaggtggccggagcacatctggaactcgatacc
aaccggcgcagcgacgccggtctggttcgggcgctgtcgcacatctacggtggcgcggcc
ctcggccatccggcgatcgtcgtctccgacgtggccgccgtgcaccccggatcgcgactg
tccggggcgatcccggtgcggttgcgggtgctgccccgagccgggctcgggccgcggaac
aagtcgggtttcccggcggtggggcgagtccgggacggggtggcggccgacctcgccgcc
gacctggtccggctgctggccgatccgccgttgctgcacgacgaggccgggtcgcgcccg
ctcggcccgggcgacatcgcagtgctggtccgcacccgaaatcagctcgcgacggtgcgg
gcggcgctggaccgggtcggactggcgtcggtgctggccgggggaagcagcgtgttcggt
acgacgagcgcggtcgcttggctgcacctgttgcaggcgttggagcaaccgcaccgcggt
gatcgggtgcggctcgcggcactcggcccgctgctcggctggacggtatcggagctggac
gtgcgtggcccggacgcggtcgcggagatcggcagccgactccgcgagtatgccgcgctg
ttgctcgggtcgggttttgcggcgatgttcgagcggttggccgagcaagcccggctcgcc
gaacgcctgcttgcgctggacggcggcgagcgcgaactgaccgatctgcgccacctggcc
cagctgctggatcgggtcatggtcgacgaccaccgcgggccgaccgaactggtgcgctgg
ttgtccgaccggatcgccgagccggcgaccggcggaccggccgaccggagccgccggctg
gatcgggacgccgccgcgatccagttggcgaccgtccatgccagcaaggggctcgagttt
ccggtggtttacctgcccttcggctgggacaccggccgtaacccgtatccggcgaccctg
ttgttgcacgacgagcggggcgaccgcctgctggatgtcggcgacgagtccgcgcccggc
taccgtgagcggcgccgtcggcacgaggccgaacaggccggggaggaactccgcctgctc
tacgtcgggttgacccgggcgcgctgtcaggtggtgatctggtgggcgccggcattcacc
acggccgagtctccgctgcatcggctgattctggggcgcgcacccggttcggcgacggtg
ccgggtcgggcccgggtgccggccgacgcagcggtcggcgccgacctggacgcttgggcg
gaaccggtcgccgacgtgctcgcggtggaacaggtgcgcgacgcgccgccggatcatggt
cgtcggcgcaccgccaccgccgacctggagccgctcgaggttgcccgattccggcgtcgg
ctcgatctggattggcggcgcacctcgtactcggcgctgaccgtcgaccgccacgcagcc
ccggccggcgggcccggtggtgccggggtacgcagcgaggccgaggacccgggtcgcgac
gacgagccggccgacgacgcgagcacgccggtcggcgccgacacggtccgggccggcgcg
ctcgcgtcgccgatgagcgatctgcccgcgggtccgctgttcggcgtgctggtgcacgag
gtgctggagacggtcgacacgggcgcggccgacctccgcgccgaggtccggcggcggtgt
acggcatcgatcgaatcgcgactcgccgaggtcgatccggatctgctgaccgatgcattg
gggcacgtgctggccacgccgctaccggatggcgtcaccctggctgcaatcgcgccgcgg
gatcggctcaccgagttggatttcgagcttccgctcgccggtggtgccgatccggtcgct
gccgccgccactgccccggagatcgccgcgctgctacgccgccatctcgccacggacgat
ccgctgatcgagtatccggaccggctggcggagctggctgcggacccgctgcggggctac
ctcaccggcagcatcgacgcggtgctgcgcctgcccgggccacgattcgcgatcgtcgac
tacaagaccaaccgactcgcggccggaccactgaccgtcgatcattaccggccggatcgg
atggcggccgagatggtgcgcgccgactatccgctgcaggcgttgctgtactcggtggcg
ctgcatcggtatctgcgttggcggctgcccggctaccacccgcacgcacatctggccggg
gtccgatacctgttcgtgcgcggcatggccggcccggcgacgccggcgggctgtggtgtg
ttcgattggcgcccgagcccggagctgatcgtggcactctcggatcgattggccggaggc
tcggcgtga
DBGET
integrated database retrieval system
