Spirillospora sp. NBC_01491: OHA34_29490
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Entry
OHA34_29490 CDS
T09711
Symbol
rfbC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spiq
Spirillospora sp. NBC_01491
Pathway
spiq00521
Streptomycin biosynthesis
spiq00523
Polyketide sugar unit biosynthesis
spiq00541
O-Antigen nucleotide sugar biosynthesis
spiq01100
Metabolic pathways
spiq01110
Biosynthesis of secondary metabolites
spiq01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spiq00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
OHA34_29490 (rfbC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
OHA34_29490 (rfbC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
OHA34_29490 (rfbC)
Enzymes [BR:
spiq01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
OHA34_29490 (rfbC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
WUU88565
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All DBs
Position
complement(6328490..6329083)
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AA seq
197 aa
AA seq
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MDPLGIKGAFSFSPRVHGDGRGSFHEWFRSDLLQKQTGHPLHLAQANCSISARGALRGVH
FADVPPGQAKYITCVRGAILDVVVDLRVGSPTFGTWEAARLDDEEHRCLYIAEGLGHAFM
ALTDDATVVYLCSESYSPEREHGVHPLDPELGIEWPAGIEPALSAKDAAAPSFAEARDSG
LLPDYRQCLDYYAVLGA
NT seq
594 nt
NT seq
+upstream
nt +downstream
nt
gtggatccactcggcatcaaaggcgctttctcgttctccccccgtgtgcacggcgacggc
cggggctcgttccacgagtggttccggagcgacctgctccagaagcagaccgggcatccc
ctgcacctcgcacaggccaactgctcgatctcggcccgcggtgccctgcgcggcgtccat
ttcgccgacgtcccgcccgggcaggccaagtacatcacctgcgtccggggggcgatcctc
gacgtggtcgtcgatctgcgcgtcgggtcgccgacgttcggcacgtgggaggcggcgcgg
ctcgacgacgaggagcaccgctgcctctacatcgccgagggtctcggccacgcgttcatg
gcgctgaccgatgacgccacggtggtctacctctgctcggagtcctacagccccgaacgt
gagcacggcgtgcaccccctcgaccccgagctcggcatcgagtggccggccgggatcgag
ccggccctgtcggccaaggacgccgccgccccctcgttcgccgaggcgcgcgactccggc
ctgctccccgattaccggcagtgcctcgactattacgccgtactcggcgcctag
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