Stylophora pistillata (Smooth Cauliflower Coral): 111321768
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Entry
111321768 CDS
T05774
Name
(RefSeq) Bloom syndrome protein homolog
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
111321768
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spis03019
]
111321768
03400 DNA repair and recombination proteins [BR:
spis03400
]
111321768
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
111321768
Messenger RNA biogenesis [BR:
spis03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
111321768
DNA repair and recombination proteins [BR:
spis03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
111321768
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
ResIII
Motif
Other DBs
NCBI-GeneID:
111321768
NCBI-ProteinID:
XP_022780469
EnsemblRapid:
LOC111321768
LinkDB
All DBs
Position
Unknown
AA seq
432 aa
AA seq
DB search
MYAQAGITFMPLWILMTSADLGLLCYIVIPVINSTNHLSISTNMIIGNEPRDKQRDVFIN
LPTGFGKSLIYQALPLVFDAMHREGHIVVVISPLVSLMKDQVQKLKNLGISAITLSDIEE
GDANAVEKGIFSVIYGSAEAFLKITRWRKMLTSEVYRKKLCAIAVDEARHKAVMLALTAT
ATTSTRETITEMLLMDNPHVIYENPCKTNIAYSVHYMDKERLVGDCFQWLADELKEKKEK
TTITIVYCQTIKQCCLIYSVLKGMHGRELYSNSADDPGHVLLEMLHSCTPVKNKDTVLYA
FQKEESPVRVLVATIAFVMGVDCKGVHRTIHFGPSNNIEAYIQETGRSGRDGKQSVACLI
YTDREFEDEFREDWNDLLNDESLFELAIENLSLSQLEASTCAELSCELHDESGKFEVPAA
ALDLLENISISE
NT seq
1299 nt
NT seq
+upstream
nt +downstream
nt
atgtatgcacaggcagggattactttcatgcctttgtggattctgatgacctccgccgat
ttgggcttgctttgctacattgtcattcctgtcataaactcgacaaatcatttgagcata
tctacaaacatgatcataggaaatgaaccaagagataagcagagagatgttttcattaat
ctgcccactggatttggaaaatccttaatttatcaagcgttaccgttggttttcgacgcc
atgcatagagaaggccatattgttgttgtcatttcacctcttgtaagtcttatgaaagat
caggtacaaaagttaaaaaatcttggaatctctgccatcaccctcagtgacatcgaggaa
ggagacgcgaatgcagttgagaaaggtatcttctcagtcatttatggaagtgcagaggcg
tttttgaaaatcacacgatggagaaaaatgttaacaagcgaagtttaccggaaaaagttg
tgcgcaattgcagtcgacgaggctcgtcataaagcagtgatgttagcactgactgctaca
gcaaccacttcaacaagggagactatcacagaaatgttattgatggataaccctcatgta
atctatgaaaacccttgcaaaaccaatattgcttactcagttcactacatggataaagag
agattggttggagattgttttcagtggttggccgatgaactcaaagaaaaaaaagagaaa
acgactataacaattgtttattgccagacaataaaacagtgttgcctaatatactctgtg
ttgaaaggaatgcatggacgggagttgtactccaattcagcagatgatccaggacacgtg
ttgcttgaaatgcttcattcttgcacccctgtcaaaaacaaagatacggtattgtatgct
ttccaaaaggaagaatctccagtaagagtgctggtagcaaccattgcatttgtaatgggt
gttgactgcaaaggcgttcatcgtaccatccactttggtccatccaataacattgaggca
tatattcaggagactggacgatcaggtagagatgggaaacaaagcgtggcttgcctcatt
tatacggaccgtgaattcgaagatgagtttagggaagattggaatgacttgttgaatgat
gaatcattgtttgaacttgctattgagaatctatctttatcacaacttgaagcaagtaca
tgtgctgaactctcttgtgaacttcatgatgaatcagggaaatttgaagtgccagcagct
gccttggatttacttgaaaatatctccatctctgagtaa
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