Stylophora pistillata (Smooth Cauliflower Coral): 111323456
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Entry
111323456 CDS
T05774
Name
(RefSeq) probable ATP-dependent RNA helicase DDX46
KO
K12811
ATP-dependent RNA helicase DDX46/PRP5 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
111323456
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spis03041
]
111323456
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111323456
Spliceosome [BR:
spis03041
]
Complex A
U2 snRNP components
U2 related factors
111323456
Complex B
111323456
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
iPGM_N
Motif
Other DBs
NCBI-GeneID:
111323456
NCBI-ProteinID:
XP_022782538
EnsemblRapid:
LOC111323456
LinkDB
All DBs
Position
Unknown
AA seq
796 aa
AA seq
DB search
MADVSKEVKKINAVDQKKKVGKTGKATVITHVVTKPKKRDPTKGELMENDQDALEYSSEE
EKEDETIESTYAHFKTKKKKDLQAVDHDKVYYSSFRKDFYVEVPELAKLTQEEVDEYRAK
LENIRVRGKDCPKPVKTWAQSGVSLKILDVLKKNGYEKPTPIQAQAIPVIMSGRDMIGIA
KTGGGKTLAFLLPMYRHVLDQPELDREDGPIGIIMTPTRELALQIFRECKKFCKPLNLRA
VCVYGGTGISEQIAELKRGAEIIVCTPGRMIDMLTANNGRVTNCRRCTYLVLDEADRMFD
MGFEPQVMRIIDCIRPDKQTVMFSATFPRQMETLARKILTKPIEIQVGGRSVVCSDVTQH
VIVIDEDDKFLKLLELLGIYQEDGSVLVFVEKQENADVLFKDLLRRSYPCLSLHGGMDQF
DRDSTIADFKNGVCNLMIATSVAARGLDVKQLILVVNYDCPNHYEDYVHRCGRTGRAGRK
GTSYTFVTPEQGRHAGDVVKALELSGTEVPEDLRKLWNDYTEERKAEGKNVVKNSGFTGK
GFKFNAEEDAKVNEAKKIQKWALGLQDSDDEAEAEEKAVEEIDKQLDAVFSKGKPHIKKA
APEAKGEQIKGEQQAKLNLATSIAAKINQKIIAGTNNMDPTQQAASQIIKGGTVTALTGL
GLAKQLAEKIHGKIGYEAPVEEVKQDEKKTEEEQRYEDEVEINDFPQTARWKVTSKETIM
NITEVSEAAITVRGTFFPPGKEPKLEGERKIYLYIEGPSERSIYLAKLEIKRVVKEEMIR
LGSFRGPQSTGRYKVL
NT seq
2391 nt
NT seq
+upstream
nt +downstream
nt
atggctgatgttagtaaagaggtgaagaaaatcaatgctgtggatcaaaagaaaaaagtt
ggaaaaactggaaaggcaacagttataactcatgttgtaaccaaaccaaagaaaagggat
ccaactaaaggagaattaatggaaaatgatcaagatgcactggagtattcctccgaagaa
gaaaaagaggacgaaaccatagagtcaacctatgcgcactttaaaaccaagaaaaagaag
gatctacaggccgttgatcatgataaagtgtattactcgtcattcagaaaggatttttac
gtcgaagttcccgaacttgcaaaactgacccaagaagaggtagatgaataccgtgcaaag
ctagaaaacatcagagttcgtggtaaagattgtccaaaacctgtaaaaacatgggcccag
tcgggagtgagcctgaaaattcttgacgttcttaaaaagaatggctatgagaaacccaca
ccgattcaagctcaagcgatacccgttattatgagtgggagagatatgatcggaattgct
aaaacaggaggtgggaagacattagcgtttcttctgccaatgtaccgccatgttcttgat
cagcctgaacttgatagagaggatggaccgataggcataattatgactccaacaagagaa
ctggctcttcaaattttccgggagtgtaagaagttctgcaaacctcttaatcttcgagct
gtctgtgtgtacggtggcacaggaatcagcgagcagattgcagagctcaaacgtggagca
gaaatcattgtttgcactccgggcaggatgatagacatgttgacagcgaataatggtcgg
gtgacaaattgtcgacgttgcacgtatttagttctggatgaagccgacagaatgtttgac
atgggatttgaacctcaggtgatgagaattatcgattgtatcagaccagacaagcagacg
gttatgttttccgcaactttccctcgtcagatggaaactctagcccgaaagatcctcaca
aaaccaatcgagatacaagttggcggccgaagtgttgtttgctcagatgttacacaacat
gtgattgttattgatgaagacgacaaattcttaaaactacttgagttgctcggcatttac
caagaagacggtagcgttttggtgtttgtagaaaaacaagaaaacgccgacgtgttgttt
aaagatttactgagaaggtcctatccatgtctgtctcttcatggaggcatggaccagttt
gatcgtgatagtacaatcgctgacttcaaaaatggcgtctgtaacttaatgattgcaact
tctgtggcagcgagaggcctggatgtgaaacagctgatcttagttgtgaattatgactgt
ccgaatcattatgaagattatgttcatcgatgtgggcgcactggtcgtgctgggaggaaa
ggaacctcttatacgtttgttactcctgaacaaggacgacatgcgggggacgtcgtgaag
gctttagaactgtccggcacagaagttccggaagaccttcggaaactttggaacgactat
acagaggagagaaaggcggaaggaaagaatgtagttaaaaacagcggcttcactggaaaa
ggattcaaatttaacgcggaagaagatgctaaagttaacgaggcgaagaagatacagaaa
tgggctcttggtcttcaagactcggatgatgaagcggaagccgaagagaaagctgtagaa
gaaattgacaaacagttggatgcagtattcagtaaaggcaaacctcacatcaaaaaagca
gctcctgaggcaaaaggggaacagatcaaaggcgagcagcaagcaaaacttaacctggcc
acaagtattgccgccaaaataaaccagaagatcatcgccggaacaaacaatatggacccg
actcagcaagctgccagtcagattatcaaaggaggaaccgttaccgctcttactggcctg
ggtctagcaaagcaactcgccgaaaagattcatgggaagatcggctacgaagctccagtg
gaggaggtgaaacaagatgagaagaagacagaggaggaacagaggtacgaagatgaagtg
gagatcaacgactttcctcaaacagctcgatggaaagtcacttctaaggaaacaattatg
aacatcaccgaggtttctgaggcagccattactgtgcgtggaaccttcttccctccaggg
aaagaaccgaaactagaaggcgaaaggaaaatctatttatatattgagggtccttctgaa
cgttcaatctatctggcaaaactggaaataaaacgagtcgttaaagaagaaatgatcaga
ttgggttctttccgtggtcctcagtctactggaagatacaaagttctctga
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