Stylophora pistillata (Smooth Cauliflower Coral): 111327864
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Entry
111327864 CDS
T05774
Name
(RefSeq) general transcription factor IIH subunit 4-like
KO
K03144
transcription initiation factor TFIIH subunit 4
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03022
Basal transcription factors
spis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111327864
09124 Replication and repair
03420 Nucleotide excision repair
111327864
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111327864
03400 DNA repair and recombination proteins [BR:
spis03400
]
111327864
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111327864
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111327864
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Tfb2
Tfb2_C
Helicase_C_3
SinI
Motif
Other DBs
NCBI-GeneID:
111327864
NCBI-ProteinID:
XP_022787897
EnsemblRapid:
LOC111327864
LinkDB
All DBs
Position
Unknown
AA seq
279 aa
AA seq
DB search
MKCETAGTSQVISPAGFQFLLMDTASQVWYFMIQYLETVEGIGMDLVECLSFLFQISFAS
LGKDYSTEGMSESQLKFLQHLREFGLVFQRKRKSRRYYPTRLAINLASAGIGSSTVINTD
QKGFIVVETNYRLYAYTNSSLQVALVGLFAEILCRFPNMCVGALTRDSVQQALSSGISAE
QILHFLRTRAHPEMLKTNPIIPPTISDQIRLWELERSRMKFTEGVLYNQFLSQADFETLK
KYAEDLGVLMWANSSKRVIVVSRSGHDDVKRFWKRQKNT
NT seq
840 nt
NT seq
+upstream
nt +downstream
nt
atgaaatgtgagacagccggcacatcacaagttataagtcctgctggatttcagttttta
cttatggacacagcttcacaagtgtggtactttatgattcaatacctggagactgttgag
ggaataggcatggatcttgtggagtgcctgtcttttttatttcaaattagctttgcaagc
cttggcaaggactactcaacagagggaatgagtgagtctcaactgaaatttcttcaacat
ctgagagagtttggtcttgtctttcaacgaaagcgaaagtcacgaagatactaccccacc
agattagccattaatttggcttcagcaggaatagggagttcaactgtcattaacacagat
cagaagggctttattgtcgttgaaacaaactaccgtctttatgcatacacaaattcatct
ctgcaagtagctcttgtaggattatttgctgagattctctgcaggtttcctaacatgtgt
gttggtgccttgacaagagacagtgttcagcaggcactatcaagtggaatatctgctgaa
cagattcttcacttcttgaggactagagcacaccctgaaatgttaaaaacgaatcccatc
ataccaccaacaataagtgatcaaattcgactctgggaactggaaaggagcagaatgaag
ttcactgaaggtgtgttatacaaccagttcctctcacaagcagattttgaaaccctaaaa
aagtatgctgaggatctcggtgtacttatgtgggccaactcgtcaaagagagttattgta
gttagccgctcgggtcatgatgacgttaaaaggttttggaaacgacagaaaaacacgtga
DBGET
integrated database retrieval system
