Stylophora pistillata (Smooth Cauliflower Coral): 111328835
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Entry
111328835 CDS
T05774
Name
(RefSeq) general transcription factor IIH subunit 2-like isoform X1
KO
K03142
transcription initiation factor TFIIH subunit 2
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Pathway
spis03022
Basal transcription factors
spis03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
111328835
09124 Replication and repair
03420 Nucleotide excision repair
111328835
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
spis03021
]
111328835
03400 DNA repair and recombination proteins [BR:
spis03400
]
111328835
Transcription machinery [BR:
spis03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
111328835
DNA repair and recombination proteins [BR:
spis03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
111328835
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ssl1
VWA_2
C1_4
VWA
Motif
Other DBs
NCBI-GeneID:
111328835
NCBI-ProteinID:
XP_022789099
EnsemblRapid:
LOC111328835
LinkDB
All DBs
Position
Unknown
AA seq
394 aa
AA seq
DB search
MANDEDSGGYRWLNQYERTWEVIQEDAEGSLQTVVDEISHRTKRRRVMGRSGNIRLGMMR
HLFIIVDMSRAMEEADLKPSRLACSVKLLESFVTEYFDQNPISQIGIIVTRNKRAEKLTE
LSGNPQVHIGTLQKAAAKPCQGEPSLQNAMESAVQWLRHMPGHASREILILFGSLTSCDP
GDVSETVQTLQRQNIRCSIIGMAAEVRVCRTICAETQGSYGVILDERHYRELLMQHVTPP
VAKADAEAALIRMGFPQHLSSGPPSLCMCHLDSNGIKGLGTSGYFCPQCKSKYCDLPVEC
KVCGLTLVCAPHLARSYQHLFPLPQFTETDLSTPVDGQSLPRQNHCFACQRVFTEQTVYS
CPQCTQFFCMECDIYIHDSLHSCPGCTASPQGEG
NT seq
1185 nt
NT seq
+upstream
nt +downstream
nt
atggcgaacgatgaggattcgggaggctatcgctggttaaatcaatatgaaagaacgtgg
gaagttattcaagaggatgctgaaggttctcttcaaacagtggtggatgaaatttcacac
aggaccaaaaggaggagagttatgggaaggagtggtaacattcgacttgggatgatgagg
cacttgtttatcattgtggatatgtccagagctatggaggaagcagatttaaaaccgtca
cgcctggcatgttctgtcaagcttttggaaagttttgtcactgaatactttgatcagaat
cctatttcacagattggaattattgtgaccagaaacaagagggctgaaaaactgacagaa
ctaagtggtaatccacaagttcacattggcactctccaaaaagctgctgctaaaccttgt
caaggagaaccatcactgcagaatgccatggaatctgctgttcagtggctgagacatatg
ccaggccatgccagtcgggaaatacttattctatttggaagccttacatcctgtgaccct
ggagatgtctcggagacagttcagactcttcagcgacaaaatataaggtgttctatcata
ggcatggctgcagaagtacgtgtttgcagaacaatttgtgcagaaacacaaggaagttat
ggtgttattcttgatgagagacattacagagaattattgatgcagcatgttacaccacct
gtagctaaggctgatgcagaagctgctttgattcgaatgggtttcccacagcatctttca
agcggaccaccctccttgtgcatgtgtcatttggatagtaacggtattaaaggactcggc
acgtcaggatacttctgtccgcagtgtaagagcaagtactgtgacctgccagtagaatgc
aaagtttgtggtttaacgctagtgtgtgcgcctcatttggctcgttcgtatcagcactta
ttcccgcttcctcagttcactgaaacagatttgtcaactcctgtagatggacagagctta
cccagacaaaatcattgtttcgcctgccaaagagtgttcacagaacaaacggtatattct
tgtcctcaatgtacacagttcttttgtatggaatgcgacatctatattcacgactccctc
cacagctgtcccgggtgtactgcctctccacagggggagggctag
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integrated database retrieval system
