Stylophora pistillata (Smooth Cauliflower Coral): 111330707
Help
Entry
111330707 CDS
T05774
Name
(RefSeq) LOW QUALITY PROTEIN: ATP-dependent RNA helicase DDX1-like
KO
K13177
ATP-dependent RNA helicase DDX1 [EC:
5.6.2.7
]
Organism
spis
Stylophora pistillata (Smooth Cauliflower Coral)
Brite
KEGG Orthology (KO) [BR:
spis00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
spis03041
]
111330707
03016 Transfer RNA biogenesis [BR:
spis03016
]
111330707
Enzymes [BR:
spis01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.7 DEAD-box RNA helicase
111330707
Spliceosome [BR:
spis03041
]
Other splicing related proteins
Spliceosome associated proteins (SAPs)
RNA helicase-like proteins
111330707
Transfer RNA biogenesis [BR:
spis03016
]
Eukaryotic type
tRNA spricing factors
tRNA splicing ligase complex
111330707
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DEAD
Helicase_C
SPRY
Motif
Other DBs
NCBI-GeneID:
111330707
NCBI-ProteinID:
XP_022791347
EnsemblRapid:
LOC111330707
LinkDB
All DBs
Position
Unknown
AA seq
723 aa
AA seq
DB search
MAGHFSEFGLLPEICKAVEDMGWLLPTDVQAEAIPLILGGGDVLMAAETGRGKTGAFSLP
VIQIVHETIREARSGRKSTKPTSAAPPDVPTKFKMNVYDRDQEFAIDDKGYLCQSRNHFK
WQGCRSTLGVNKGMYYYETTVTDEGLCRVGWATDLASLDLGTDKQGYGFGGTGKKSFGKQ
FDTYGEPFGINDTLGCYIDLDNGSVKYSKNGVDFGEAFEISQNLQGSTFFAAVVLKFQGR
YIGLSKAPPDAVSASNIKGGAQTKPGKFNNKCSPSAIIMEPSRELAQQTHDQVSLFRKHL
PSPQVKEVLLIGGENVKAQIQTLSEGVDILTGTPGKLDDFISTDKISLSQVRFFILDEAD
GLLAQGNRELIMRIFKKIPKTSPDGKRLQMIVCSATLHSVEVKKLADRIMHFPTWVDLKG
KDSVPETVHHVVCRVDPRVDTSWQQLRSAVKTDGIHAMDKIKPGSQSQESLSEAVKVLKV
GYLVKAIQEHKMDQAIIFCRTKLDCDNVENYLLTLEGGPNAMVNEYSCVCLHSDRPPKER
KANLELFKDGXARFLICTDVAARGIDISGVPYVVNVTFPDDEQNYVHRIGRVGRAERMGL
AISLVSEIKEKVWYHTCPNRGKGCNNTQLRDKGGCSIWYDEKEYLAAVEDHLKETISCIE
PNMKVPRNEFDGKVTYGKKRRGAGPIFESHTAELAPSVRELPEMEYKAQTSFLTLQHKKW
MKH
NT seq
2172 nt
NT seq
+upstream
nt +downstream
nt
atggcgggtcatttttcagagtttggtctactgcctgaaatttgcaaagcagttgaggac
atgggatggcttcttccaacagatgtacaagctgaagccattcctcttattcttggtggt
ggagacgttcttatggcagcagaaactggacgtggaaaaactggagccttttccttgcct
gtgattcagattgtacatgagacaataagagaagcacgaagtggccgtaagagtaccaaa
ccaacatctgctgccccaccagatgtaccaaccaagttcaaaatgaatgtgtatgataga
gatcaggagtttgctattgatgataagggttatctgtgtcagagtcgcaatcattttaag
tggcaaggatgccgttctactttgggagtcaacaaaggaatgtattattatgaaacaact
gtcacagatgaagggctctgtcgtgtgggatgggcaacagacctggcttcattggatctt
gggactgacaaacaggggtatggatttggaggcacagggaagaagtcatttggaaagcag
tttgacacttatggggagccatttgggattaatgacacacttggatgctatattgatctt
gataatggttctgtaaaatatagcaaaaacggagtggattttggggaggcatttgaaatt
agtcaaaatcttcaaggaagcaccttttttgcagcagttgtgttaaagttccagggtaga
tatataggactttccaaagcaccacctgatgctgtgagtgcctcgaacatcaaaggagga
gcacagaccaaacctggcaagtttaataacaaatgtagtccatcagccatcataatggag
ccatctagagaattagcccaacagacccatgatcaggtatcattgttcaggaagcactta
ccgagtccacaagtcaaagaggtgcttttgatcggaggagagaatgtgaaggcacaaatt
cagacactgagtgagggggtggacatcttgaccggaacacctggaaagctcgatgatttc
atttcaactgataaaatcagcctttctcaggttcgctttttcattttagatgaagcggat
ggtttgctggcacagggaaatcgagagctaatcatgagaatctttaaaaagattccaaaa
acgagccctgacggtaaacggttacagatgatcgtgtgttcggcaacccttcactcagtg
gaagtgaaaaagttagctgatagaatcatgcattttccaacctgggttgacctcaaagga
aaggatagtgtgccagagactgttcatcatgtggtctgtcgtgtggatcctagggtggac
acttcgtggcaacaactcagatctgcagttaagactgacggaattcacgcaatggacaaa
ataaagccaggcagtcagagtcaagaatctttgtctgaagctgtcaaggttctgaaggtt
gggtacctcgtcaaagctatccaggaacacaaaatggaccaggctatcattttctgtcgt
acaaaactggattgtgacaatgtggaaaactatctgttaaccctggaaggaggtccaaat
gccatggtcaacgaatattcttgtgtgtgtctccatagtgacagacctccaaaggaaaga
aaagcgaacctcgagttgtttaaggatggctaggcaagatttctaatctgtactgacgtg
gcagcgaggggtatcgatatttctggtgtaccttatgtcgtgaatgtaacatttccagac
gatgagcaaaactacgtgcacagaattggacgtgtaggaagggcagaaaggatgggtctg
gcaatttcactcgtctcagaaattaaagaaaaggtatggtatcatacctgtcccaatcgt
ggtaaaggatgcaacaacacgcagcttagggataaagggggctgttcaatatggtacgac
gagaaagagtatctagcggccgtggaggatcatctgaaagagacaatctcttgcatagaa
cccaacatgaaagttccccgtaacgagtttgatggtaaagtcacctacggcaagaaacgt
agaggagcggggcccatctttgagtcacacaccgctgaactcgcgccatcagtcagagaa
ctaccagaaatggagtacaaagcacagacgtccttcttaactttacagcacaaaaaatgg
atgaaacattaa
DBGET
integrated database retrieval system
