Spiribacter sp. 2438: GJ672_08705
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Entry
GJ672_08705 CDS
T06294
Symbol
betA
Name
(GenBank) choline dehydrogenase
KO
K00108
choline dehydrogenase [EC:
1.1.99.1
]
Organism
spiz
Spiribacter sp. 2438
Pathway
spiz00260
Glycine, serine and threonine metabolism
spiz01100
Metabolic pathways
Module
spiz_M00555
Betaine biosynthesis, choline => betaine
Brite
KEGG Orthology (KO) [BR:
spiz00001
]
09100 Metabolism
09105 Amino acid metabolism
00260 Glycine, serine and threonine metabolism
GJ672_08705 (betA)
Enzymes [BR:
spiz01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.99 With unknown physiological acceptors
1.1.99.1 choline dehydrogenase
GJ672_08705 (betA)
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GFIT
Motif
Pfam:
GMC_oxred_N
GMC_oxred_C
NAD_binding_8
Lycopene_cycl
DAO
FAD_binding_2
Thi4
Pyr_redox_2
HI0933_like
Motif
Other DBs
NCBI-ProteinID:
QGM22325
UniProt:
A0A6B8JTM0
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Position
1738166..1739827
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AA seq
553 aa
AA seq
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MSDQRFDYIIIGAGSAGAVLASRLTEDPDCRVLLLEAGPMDYSLWIHMPSAFDKPMGSRR
YNWGYATEPEPFMDNRRMDCPRGHVLGGSSSINGMAYVRGNALDYEGWAEDFGLESWRYA
GVLPYFRRAEDFDQGANDYHGAGGPLHVTTGAMRNPLYGAFVAAGTAAGYPATDDMNGHQ
QEGFGPMFMTTRDGVRCSTANAYLRPVLKRPNLVLKTRALTETIRFDGETATGVRYRHGG
QALTAHADGEVLLCAGAINSPQILKRSGVGPGDELHQHGIDVVHELPGVGENLQDHLEVY
VQYACREPITLFSALKPWNQARIGLQWLTTRRGLGASNHFESGGFIRTEAGVPYPDVQYH
FMPIAVTYDGSVSADCHGFQAHVGPMRPESRGRVRLRSAEPEAPPSIVFNYMGTERDRWE
MRQAVRLTREILEQSPMDRFRGDPLSPGPDITSDEAIDAWVRVHGESAYHPAGTCCMGTA
DDPAAVVDGDGRVHGLQGLRVVDASIMPRITTGNLNAPTIMMAEKLADAIRGRDTEWDPK
PWYQSPDWQHRQR
NT seq
1662 nt
NT seq
+upstream
nt +downstream
nt
atgtccgatcagcgctttgactacatcattattggcgccggctccgccggtgcggttctg
gccagccggctgactgaggatccggactgccgggtgctgctgctggaagccggtcccatg
gactacagcctgtggatccacatgccctcggcgttcgacaagcccatgggcagccgtcgc
tacaactggggctatgccaccgagccggagccgttcatggataaccgccgcatggactgc
ccgcggggccacgtcctgggcggatcctcctccatcaacggcatggcctatgtccgtggc
aatgccctcgactacgagggctgggccgaggattttggcctggaaagctggcggtatgcc
ggcgtgctgccctatttccgccgggcggaagactttgaccagggcgccaatgactatcat
ggcgccggcggcccgctgcacgtcaccaccggtgccatgcgcaacccactctatggggcc
ttcgtcgccgcgggtaccgccgccggctatccggccaccgacgacatgaacggccatcag
caggaaggcttcggcccgatgttcatgaccacccgggatggcgttcgctgctccaccgct
aacgcctacctccgtccggtgctgaaacggcccaacctggttctcaagacccgggccctg
accgaaaccattcgcttcgacggggaaaccgccaccggggtccggtatcgccatggcgga
caggcactcaccgcccacgccgacggagaagtgctgctctgtgccggtgccatcaactcg
ccgcagatcctcaagcgctccggagtcgggcccggtgacgagctgcatcagcatggcatc
gacgtggtccatgagctccccggggtgggagaaaacctccaggatcatctggaggtctac
gtgcagtacgcctgccgggagcccattaccctgttcagtgcgctcaagccctggaaccag
gcccgtatcggcctgcagtggctgaccacccgccgcggcctgggcgccagcaaccacttt
gaatccggcgggttcatccgcaccgaggcgggggtgccctatccggatgtgcagtatcac
ttcatgcccatcgcggtcacctacgacggcagcgtctcggcggattgccatggctttcag
gcccatgtcggccccatgcgcccggagagccgcggccgcgtccggttgcgaagcgccgag
ccggaggcgccgccgtccatcgtcttcaactacatgggcaccgagcgggatcgctgggag
atgcgtcaggcggtccgcctgacccgggagatcctggagcagagccccatggatcgattc
cgtggcgatccgctttcgccaggccccgacatcaccagcgatgaggccattgatgcctgg
gtgcgcgtccacggtgagagtgcctatcacccggccggcacctgttgcatgggcacggcg
gatgaccccgccgccgtggtagacggcgacggtcgggtccatgggctgcagggcctgcgg
gtggtggatgcctccatcatgccgcgcatcacgacgggcaacctcaatgcgcccaccatc
atgatggcggaaaaactcgccgacgcgatccgcggccgtgacaccgagtgggacccgaaa
ccctggtatcagtcaccggactggcagcaccgccagcgctga
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