KEGG   Shewanella pealeana: Spea_2292
Entry
Spea_2292         CDS       T00606                                 
Name
(GenBank) UvrD/REP helicase
  KO
K03658  DNA helicase IV [EC:5.6.2.4]
Organism
spl  Shewanella pealeana
Brite
KEGG Orthology (KO) [BR:spl00001]
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03400 DNA repair and recombination proteins [BR:spl03400]
    Spea_2292
Enzymes [BR:spl01000]
 5. Isomerases
  5.6  Isomerases altering macromolecular conformation
   5.6.2  Enzymes altering nucleic acid conformation
    5.6.2.4  DNA 3'-5' helicase
     Spea_2292
DNA repair and recombination proteins [BR:spl03400]
 Prokaryotic type
  Other factors with a suspected DNA repair function
   DNA helicases
    Spea_2292
SSDB
Motif
Pfam: UvrD-helicase AAA_19 UvrD_C zf-C4_Topoisom UvrD_C_2 AAA_30 AAA_12 ResIII
Other DBs
NCBI-ProteinID: ABV87612
UniProt: A8H4X5
LinkDB
Position
complement(2777679..2780669)
AA seq 996 aa
MELRRHSVEFGFVQGIIFCNGAKLCEQGLTINGKLHPYPLFNQTVEVREGWFTQTLVWGD
KRFSFFRFIDSKPLFKYALSNHVLHSKAALQVSYDDLLADIMRFDNRFGLHKRYLRDSDT
NQLQHEFQDSLAVFNRVEHFSQLGFDTSQFNCRLAKFIKQPEAFTTKYNQWWQEKQLDAH
QQLFDSIEANPLTPLQRQACVIDENNTLVIAGAGTGKTSTMAAKAAYLVNQGLARPEEIL
MLAYGRDARVELEQRISTIAGVSTHGDGTLAGVKVSTFHALGKEIIQYYLNRSTQVSVLA
SDDKRLTQFVDLQIDDIVADPQMADPVADYFGRYLYPQVNELDFNSQGQYRAYLKNNEIR
ALSGDLVKSFQELTICNYLYTHGIEFEYEPKYRSQESLEITEPGKSVYQPDFYIPVLDAY
LEHFGLDKQGNTRPDIDKAAYQQSREWKISLHKRHNTCLLQTFSWQAEKGGLEQALEALL
CGRCGELGLEQSQLFKPISPQEVFAQVKHLGVYRNVSRLMSSFLGLFKSSSYTLAMLESL
TMTAGSNKKIATYNQLRWKAFLHLFRWVYDRYDKQLKLLNTLDFSDMIAEALKITQAKDF
HQKTAERFRYKYIMVDEFQDISPERAKLVTELRDSSPGCALFCVGDDWQAIYRFTGSDLG
LTTQFSETFGATATVMLDKTFRFNDRIEKVASQFIQANPAQLKKRLTTHSHSENPQVCLL
INNKEAAVAQAFDSIYEVTSHIKKPKRATVMLIGRFNASLKELSRWQKSYPQFEISGFSA
HASKGKQADFVIVLDVNDDKYGFPCKIDSDPILEVLLPKLDSYADTEERRLFYVALSRAK
QTVFVQAELGKESVFVKELRGFTADIRVYLSDLAPLYHEQLCCPECNEGKLIPREGRYGL
FYTCSLGQDYCDTKLEACRVCNSAPMLSNETKHFCSSAKCGHKIQVCPECISGKLVKRTN
SRTGKSFLACSSHKKGVAESCQYTCNAPDEPKETAA
NT seq 2991 nt   +upstreamnt  +downstreamnt
atggagcttaggcgacattctgttgagttcggttttgtgcaagggatcatattctgtaat
ggtgccaagctttgcgagcaggggttaaccataaacggtaagcttcatccttacccgctg
ttcaatcaaaccgttgaagtgcgtgaaggctggtttacccaaacattagtttggggagat
aagcgttttagctttttccgctttatcgacagtaaacctctgtttaagtacgctctgagt
aaccatgtgctacacagcaaagcggcgctacaagtcagctatgatgatctactggcagat
ataatgcgttttgacaatcgctttggtctacataagcgatatttacgtgattcagataca
aaccagttacagcatgagtttcaagattcattggcggtatttaaccgtgtcgagcatttt
agccagttaggttttgacaccagtcagtttaactgcagactcgcaaagttcattaagcag
cccgaggcgtttaccacaaaatataaccagtggtggcaggaaaagcagctagatgcgcat
cagcaactgtttgactctatagaggcaaacccattaacgccattacagcgtcaagcctgt
gttatagatgagaacaacaccttagtgattgcgggggcgggcacaggtaaaaccagcacc
atggcggcaaaggccgcatacttggttaatcaaggtttggcgcggccggaagagatcttg
atgctagcctacggcagagatgccagagtcgaacttgagcaacgaataagtaccatagct
ggagtttctacgcacggagatgggacattagctggggttaaagtcagtacctttcatgcc
ttaggtaaggagatcatccaatactacttaaatcgctcgacccaagtgtctgtactggcg
agtgatgataagcgtctgacgcaatttgtcgatctacagattgacgacattgttgccgat
ccacagatggccgatcccgttgccgattattttggccgttatctgtaccctcaagtgaac
gagttggattttaacagccaaggccagtatcgcgcctatctgaaaaataacgagatccgt
gcgttatcgggcgatctagttaagagctttcaagagctaaccatctgtaattacctttat
acccacggtatcgagttcgagtatgagcctaaatatcgctctcaagagagccttgagatc
acagagccaggaaagagcgtctatcaacctgatttctatattcctgtactcgatgcctat
ctagagcattttgggctggataaacagggcaatacacgtccagatatcgataaagcagcg
taccaacaaagccgtgagtggaagatttcgctacataagcgtcataacacctgcctgttg
caaacctttagctggcaggccgaaaagggcggattagagcaggctctagaggcgctattg
tgtggacgctgcggcgagctaggccttgaacagagtcagctttttaagcctatctctccg
caagaggtatttgctcaggttaaacacttaggcgtgtatcgtaatgtgagtcgcttgatg
tcgagctttttggggctgtttaagtcttcaagctataccttagccatgcttgagtcgtta
accatgactgcaggttcaaacaagaagattgcgacttataaccaactcagatggaaggcg
ttcttacacctctttaggtgggtatatgaccgttatgacaagcaacttaaattacttaat
actttagatttttctgacatgatcgccgaagcgctgaagataacccaagccaaggatttt
catcagaaaaccgctgagcgctttcgatataaatacatcatggttgatgagtttcaggat
atttcgccagagcgcgccaagttagtgacagagctgcgggactcaagcccaggatgtgcc
ctgttttgtgtgggagatgactggcaggcgatttatcgttttaccggtagcgatctcggt
ttaaccactcagtttagtgaaaccttcggcgcgacagcaactgttatgcttgacaagacc
ttcagatttaacgacagaatcgagaaggtggcttcacaatttattcaggcaaaccctgcc
cagttaaagaagcgccttacgacccatagccacagcgagaatccacaagtttgcttgctt
attaataataaagaggctgcagtcgcgcaggcttttgacagtatctatgaggtcacaagc
catataaagaaacctaagcgcgcgacggtgatgttaatcggccgctttaacgcgtcgcta
aaagagctgagtcgttggcaaaagagttatccgcagtttgagatctcaggtttttctgcc
catgcttctaaaggtaagcaagccgactttgttatcgtgctcgatgtgaatgacgacaag
tatggtttcccatgcaaaatcgatagcgatcctatcttagaagtcttgttaccaaagctt
gatagttacgccgataccgaggagcgacgcttattttacgtcgcattgtcacgagccaaa
caaacggtatttgttcaggctgaattaggtaaagagtctgtatttgttaaagagctaagg
ggctttacagccgatatacgtgtttaccttagcgatcttgctcccctatatcacgagcaa
ctttgttgccctgagtgtaacgagggcaaactcatcccaagagagggtcgttatggcttg
ttttacacttgctccttagggcaagactattgcgatactaagcttgaggcatgccgagtc
tgtaatagcgcccctatgcttagtaacgaaactaagcacttctgcagctctgcaaaatgc
ggccataagatccaagtctgtccagagtgtatttcgggtaaattagttaagcgtaccaac
agtcgtacgggcaagagctttctagcttgtagttcacataaaaaaggtgtggccgaaagc
tgtcagtacacttgcaatgctccggatgaaccaaaggaaacggcggcttag

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