Sphingomonas sp. LK11: AV944_00180
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Entry
AV944_00180 CDS
T04954
Name
(GenBank) hypothetical protein
KO
K07267
porin
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_00180
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_00180
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OprB
Motif
Other DBs
NCBI-ProteinID:
APX64527
LinkDB
All DBs
Position
complement(38777..39982)
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AA seq
401 aa
AA seq
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MTLRQSIMLMAAPMLAVLPSPALAQEEEPRAETNGEGEDERTSAFGLDLLYKADLVGVAA
GGGRRGARFLDNIDLMAAVDLNRAAGWEGASAYVGILSNAGARPNDIAGTLQGVNNIEVG
SPDAVLYQAWLQQRFAGDRGSILVGKYDLNSEFYANPSAAALIAPAFGIGSELAATGPNG
PSIFPQTDLGIRLRLEDRRHYVQAAVIRAPRGVADEGGPRSALFIAEAGLRGRTAITVGG
WTYSDRQPRIVPPGVTLGPDTAASHGLYALVEQDLAGEADKMGYWCAFLRVGLSDGLTTP
FADGMQVGVTGHGVLPSRPESLLSIGFATAGLSRAYRRANPADESPLTRSESTIELTYSD
RVARFLTLQPDVQYVHRPSGLRDALGVVVLGLRAIVDWKIH
NT seq
1206 nt
NT seq
+upstream
nt +downstream
nt
atgacgctgcgtcaatcgatcatgctgatggccgcgcccatgctggcggtgctgccgtcg
cctgccttggcgcaggaggaggagccacgcgccgaaaccaatggcgagggcgaggatgag
cggaccagcgccttcggcctcgatctgctctacaaggccgatctcgtcggcgtggcggcc
ggcgggggcaggcggggggcgcggtttctcgacaatatcgacctgatggccgcggtcgat
ctgaaccgcgcggccggatgggaaggggcgagcgcctatgtcggcatcctgagcaatgca
ggcgcgcggcccaacgacattgcgggcacgttgcagggcgtcaacaatatcgaggtcggc
agtcccgatgccgtcctctatcaggcctggttgcaacagcgttttgccggggatcgtgga
tcgatcctggtcggcaaatatgatctgaacagcgaattctacgccaatccctcggccgca
gcgttgatcgcacctgctttcggcatcgggtcggagctggccgcgacgggacccaatggg
ccgtcgatctttccccagaccgatctgggcatccgcctccgcctggaggacagacgccat
tatgtgcaggcggccgtgatccgggccccgcgcggcgtggcggacgagggcgggccgcga
tcggccctgttcatcgcggaggcgggcctgagggggcggacggcgatcaccgtcggcggc
tggacctatagcgatcggcaaccgcggatcgtgccaccgggcgtgacgctcgggcccgat
accgccgcgtcgcatggtctgtacgcgttggtggagcaggatttggccggtgaggccgac
aagatgggctattggtgcgcctttctgcgcgtgggcctgtccgatgggctgacgacaccc
tttgcggacgggatgcaggtcggcgtgaccgggcatggtgtcctgccgtcacgccccgaa
tcgctcctttcgatcgggttcgcgaccgccgggctgagccgcgcctatcgccgggccaat
ccagccgacgagtcgccgctgacgcggtcggaaagtacgatcgaactgacctatagcgac
cgcgtggcgcgcttcctgacgcttcagccggatgtgcaatatgtccatcgcccctccggg
ctgcgcgatgcgctgggcgtggtggtcctgggcctgcgggcgatcgtcgactggaagatc
cactga
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