Sphingomonas sp. LK11: AV944_11405
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Entry
AV944_11405 CDS
T04954
Name
(GenBank) DNA polymerase III subunit chi
KO
K02339
DNA polymerase III subunit chi [EC:
2.7.7.7
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03030
DNA replication
splk03430
Mismatch repair
splk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
AV944_11405
03430 Mismatch repair
AV944_11405
03440 Homologous recombination
AV944_11405
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
splk03032
]
AV944_11405
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_11405
Enzymes [BR:
splk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
AV944_11405
DNA replication proteins [BR:
splk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
AV944_11405
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
AV944_11405
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_chi
Motif
Other DBs
NCBI-ProteinID:
APX66338
LinkDB
All DBs
Position
complement(2471103..2471543)
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AA seq
146 aa
AA seq
DB search
MQVDFYHLTIAPLDRLLPVIADRVMARGGRLLIVSGDADQRAALDRQLWMIPADGFLPHA
QAGEGDDAAQPVLIAGEVQPTNGARHVALADGVWRDEALAFDRAFHFFDGDRIGEARTAW
KALADREGVERRYWKQNDQGRWEQAA
NT seq
441 nt
NT seq
+upstream
nt +downstream
nt
atgcaggtcgatttctatcatctgacgatcgcgccgctcgaccgtctgctgcccgtcatc
gccgatcgggtgatggcgcgcggcggccgattgctgatcgtcagcggcgacgcggaccag
cgcgccgcgctcgaccggcagctctggatgatcccggcggatggtttccttccccatgcc
caggcgggtgagggcgacgatgccgcccagccggtgctgatcgcgggcgaggttcagccg
accaatggcgcccgtcatgtcgcgctggccgacggcgtttggcgcgacgaggcgctggcc
ttcgaccgggcgttccatttcttcgacggcgaccgcatcggtgaggcgcgtaccgcatgg
aaggcattggccgaccgggaaggcgtcgagcggcgttactggaagcagaacgaccagggc
cgctgggaacaggcggcctga
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