Sphingomonas sp. LK11: AV944_12490
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Entry
AV944_12490 CDS
T04954
Name
(GenBank) ATP-dependent DNA helicase RecG
KO
K03655
ATP-dependent DNA helicase RecG [EC:
5.6.2.4
]
Organism
splk
Sphingomonas sp. LK11
Pathway
splk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
AV944_12490
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
splk03400
]
AV944_12490
Enzymes [BR:
splk01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
AV944_12490
DNA repair and recombination proteins [BR:
splk03400
]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecFOR pathway proteins
AV944_12490
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecG_dom3_C
ResIII
SecA_DEAD
RecG_wedge
AAA_30
TsaE
tRNA_anti-codon
Zeta_toxin
SLFN-g3_helicase
AAA_16
Motif
Other DBs
NCBI-ProteinID:
APX66510
LinkDB
All DBs
Position
complement(2709538..2711592)
Genome browser
AA seq
684 aa
AA seq
DB search
MRPDILNPLFAEVTSLKGVGPGLAKPLERLRIARVVDVAFHLPTGHIDRFPRDELMVSDA
GRVIAIPLTVKEHRASSSPRGPTRVRAEDAAGNSVALVYFGGNSGWVKKLLPIGETKVVS
GRLDLYGQDLQIVHPDLGDSAEGFREREAIYPLSEGITSRRLGALAAQAVERSPELPEWI
ESGLKAQRGWPDWKDALARIHADPADAKARERLGYDEVFANQLAMTLVRADTRKRRGRAL
NGDGRLRDMLKLPYTLTGAQSRTVREIEGDLAQDAPMLRLLQGDVGAGKTLVAAMAMLIA
VEAGAQAAMLAPTEILARQHYETLRKTLAGLPLEIAVLTGRDKGKAREATLMALAAGEID
ILVGTHAIFQETVTYRDLALVVVDEQHRFGVAQRMMLSAKGKAPPHLLAMTATPIPRTLT
LANYGEMDVSRLDEMPPGRQPIETRVVSEDRLDEVVNALGRHLSDGGQAYWVCPLVEESE
KSDLAAAEMRAETLRARFGERVGLVHGKMKPAEKDAVMEAFAGGRLGVLVATTVIEVGVD
VPNATLIVIEHADRFGLAQLHQLRGRVGRGGGLSRCLLLRGSHLSETSRARLALMRETND
GFRIAEEDLRLRGAGELLGTRQSGEMAFRLATPENMADLMQCAQDDARLLIDRDGGLEAP
RGQAARTALYLFERDAGVALLRSG
NT seq
2055 nt
NT seq
+upstream
nt +downstream
nt
atgcgtcccgatatcctcaatccgctgttcgccgaggtcacgtcgctgaaaggcgtcggt
cccggtcttgccaagcctttggagcgcctgcgcatcgcgcgcgtggtcgatgtcgccttt
catctgccgaccggccatatcgaccgtttcccacgcgacgagctgatggtgtcggatgcg
gggagggtcatcgccattccgctgaccgtgaaggagcatcgcgcttcgtcctccccgcgc
gggccgacgcgcgtgcgggcggaggatgcggcgggcaacagcgtcgcgctggtctatttc
ggcggtaattcgggttgggtgaagaagctgctgccgatcggcgagacgaaggtcgtatcg
ggtcgcctcgacctctatggccaggatttgcagatcgtccatcccgatctgggcgacagc
gccgaaggcttccgcgagcgtgaggccatctatcccctgtcggaagggatcacctcgcgg
cggctgggggcgctggcggcgcaggcggtggaacggtcgcccgaactgcccgaatggatc
gagtcggggctgaaggcgcagcgcggctggcccgactggaaggacgcgctggcccgtatc
catgccgatccggcggacgcgaaggcgcgcgagcggctgggctatgacgaagtgttcgcc
aaccagctggcgatgacgctggtccgtgccgatacccgcaagcggcgggggcgggcgttg
aacggcgacgggcgcttgagggacatgctcaagctgccctacacgctgaccggcgcgcag
agccggacggtgcgggagatcgagggcgatctggcgcaggacgcgccgatgctgcggctg
ctccagggcgatgtcggcgcgggcaagacgttggtcgcggcgatggcgatgctgatcgcg
gtggaggcgggggcccaggcagcgatgctggcgccgaccgaaatcctggcgcgccagcat
tatgagacgctgcgcaagacgctcgccgggctgccgctcgagatcgccgtgctgaccggc
cgtgacaagggcaaggcgcgggaggccacgctgatggcgctggcggcgggcgaaatcgac
atattggtcggcacccatgcgatctttcaggagaccgtgacctatcgcgatctggcgttg
gtcgtggtggacgaacagcatcgcttcggcgtggcgcagcggatgatgctgtccgccaag
ggcaaggccccgccgcacctgctggcgatgaccgcgacgccgatcccgcgcaccctgacg
ctcgccaattacggcgagatggacgtcagccggttggacgagatgccgccgggccgccag
ccgatcgagacgcgcgtggtgtcggaggaccggctggacgaagtggtcaacgcgctcggt
cggcatctgtcggacggggggcaggcttactgggtctgtccgctggtcgaggagagcgaa
aagtccgacctcgccgccgccgaaatgcgcgccgagaccctgcgcgcgcggttcggcgaa
cgggtcggcctggttcacggcaagatgaagcctgccgagaaggacgcggtgatggaggcg
ttcgcgggcggacggctgggcgtgctggtcgcgacgacggtgatcgaggtgggggtggac
gtgcccaatgccacgctgatcgtgatcgaacatgccgaccgcttcggcctggcgcagttg
caccagttgcgtgggcgcgtcgggcggggcggggggctgtcgcgctgcctgttgctgcgg
ggctcgcatttgtcggaaacgtcgcgggcgcggcttgccctgatgcgcgagacgaatgac
gggttccgtatcgccgaagaggatctgcggttgcgcggggccggcgaactgctcggcacg
cggcaatcgggggagatggcgttccggctcgccacgcccgaaaacatggccgacctgatg
cagtgcgcgcaggacgatgcgcggctgctgatcgatcgtgacggcgggctggaagcaccg
cgcgggcaggcggcgcggacggccctctatctgttcgagcgggatgcaggcgtcgcgctc
ttgcgttcgggctga
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