Sphingomonas sp. LK11: AV944_13070
Help
Entry
AV944_13070 CDS
T04954
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splk
Sphingomonas sp. LK11
Brite
KEGG Orthology (KO) [BR:
splk00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splk02000
]
AV944_13070
Transporters [BR:
splk02000
]
Other transporters
Pores ion channels [TC:
1
]
AV944_13070
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TonB_dep_Rec
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
APX67683
LinkDB
All DBs
Position
2828598..2831249
Genome browser
AA seq
883 aa
AA seq
DB search
MIVAAPVFAQSVAVVPAPATEQAQADSEPGDIVVTGFRAALENAVAEKKNRDLVVESVSA
EDIGKLPDASIAESIARLPGVTSQRVNGRSNAISIRGFAPDFSTTLLNGREQTSTGDNRA
VEYDQYPAEVVNQVLIYKTANAGLIGQGLSGTVDLKTIRPLDYGKRVISVGARGTYADIG
KLNAGSKDFGYRASATYVDQFADDTIGVALSASYLNEPYQIQEGNAWGYAQTTVGGQPVD
VIGGSKSYVTSTTLKRLGLSGTVQWRMSDSFTSTLDGFYSDFDDDQIKRGIELPLQWGSG
TSLTNAVVNNGLVTSGTFNRVEGVVRNDSFQRKAKLYSFGYNGKYKGDDGWSAFIDLSYS
KTDRDEITLETYSGTGYGQGVGATDTIGFTTGRNGTVFQPTLNYSDPNLIQLTDPLGWGG
STRQTGYFNDRQIRDEIKQYRVEIERQVETPIVSALRFGLNYTDHAKSLAPNESFVTLPN
GATIAPLPQQYRQTPTDLTYLGLGPMLSYDPRALLAGGVIVLTPNTSPDVPAKAYTTTEH
LMTAYLQADLKAQLGTAELTGNIGVQAVGTEQKSRGLIYNGTGYTNIAQGDDYWDILPSA
NLSLRLPTDWVFRVAAARQMMRPRFDDMRVALSYGFDAQQGLISGNGGNPYLRPIRSNSF
DVTVEKYFGTRGYLAAQGFYKDLKSFVYNLEQPYDYTGLPLPASLPAGIPTQGRITRPIN
GTGGKIYGVELAGTLPLGQLVGFLDGFGLTGGGSYTKTEITPTPGGEPEDIPGYSRWVAN
GTAFFEKWGLNIRGSVRYRSTFVGELSGFGANRVRRRAIDETIVDGQIGYDFQEGTFKGL
SIFVQGQNLTDTPFVTTNAGRRDEVIDYQSYGRRFLAGFTYRF
NT seq
2652 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtggccgcaccggtcttcgcgcaaagcgtcgcggtcgtgcccgcgcccgccacc
gagcaggcgcaggcggattccgaaccgggggatatcgtcgtcaccggcttccgcgccgcg
ctggaaaacgccgtcgcggaaaagaagaaccgcgatctggtcgtcgagtccgtctcggcc
gaagatatcggcaagctgcccgacgcctcgatcgccgagtccatcgcccgcctgcccggc
gtcacgtcgcagcgggtcaacgggcgctccaacgccatctcgatccgcggcttcgcgcct
gacttctcgaccacgctgctgaacggccgcgagcagacctcgaccggggacaaccgcgcc
gtcgaatatgaccagtatccggccgaagtcgtcaatcaggtcctgatctacaagaccgcc
aatgccgggctgatcggccagggcctgtcgggcaccgtcgacctgaagaccatccgcccg
ctcgattacggtaaacgcgtgatctcggtcggcgcgcgtggcacctatgccgatatcggc
aagctgaatgcgggttcgaaggacttcggttaccgcgccagcgcgacctatgtcgaccag
ttcgccgacgacacgatcggcgtcgctctgtcggccagctatctgaacgaaccgtaccag
attcaggaaggcaatgcctggggctatgcgcagacgacggtgggcggccagccggtcgac
gtcatcggcggttcgaaatcctatgtcacctcgaccacgctgaagcggctgggcctgtcg
ggcacggtgcagtggcggatgagcgacagtttcaccagcacgctggacggcttctattcc
gacttcgacgacgaccagatcaagcgcggtatcgaactgccgctgcaatggggttcgggc
acgtcgctgaccaatgcggtggtcaataacggcctcgtcacctcgggcacgttcaaccgc
gtcgagggcgtcgtccgcaacgactcgttccagcgcaaggccaagctctattcgttcggc
tataacggcaagtataaaggcgatgacggctggagcgcgttcatcgacctcagctattcc
aagaccgatcgcgacgagatcacgctcgagacctatagcggcaccggctatggtcagggc
gtcggcgcgaccgacacgatcggtttcaccaccggccgcaacggcactgtcttccaaccg
acgctgaactattccgaccccaacctgatccagctgaccgatccgctgggctggggcggc
tcgacgcggcagacgggctatttcaacgaccgccagatccgcgacgagatcaagcagtac
cgggtcgagatcgaacgccaggtcgagacgccgatcgtcagcgcgcttcgcttcggcctg
aactataccgatcacgccaagtcgctggcgcccaacgagtcgttcgtcaccttgccgaac
ggtgcgaccatcgccccgctgccccagcaatatcgtcagacgccgaccgacctgacctat
ctgggtctggggccgatgctcagctatgatccgcgcgcgctgctcgcgggtggcgtgatc
gtgctgaccccgaacaccagccccgacgtgcccgccaaggcgtacaccaccaccgagcat
ctgatgaccgcctatctgcaggcggacctgaaggcgcagctgggcacggccgagctgacc
ggcaatatcggcgtgcaggcggtcggcaccgagcagaagtcgcgcgggctgatctataac
ggcaccggctataccaacatcgcgcaaggcgacgattattgggacatcctgcccagcgcc
aacctgtcgctgcgcctgccgaccgactgggtgttccgcgtcgccgccgcgcgccagatg
atgcggccgcgcttcgacgatatgcgcgttgccctgtcctatggcttcgatgcgcagcag
ggcctgatctcgggcaatggcggcaatccgtatctgcgcccgatccgctcgaactcgttc
gacgtgacggtggagaaatatttcggtacgcgcggctatctggcggcccagggcttctac
aaggatctcaagagcttcgtttacaatcttgagcagccttacgactataccggcctgccc
ctgcccgcctcgctgcccgcgggcatcccgacgcaagggcgcatcacccgcccgatcaac
ggcaccggcggcaagatctacggcgtcgagctggcgggcacgctgccgctgggtcagctg
gtcggcttcctcgacggcttcggcctgacgggcggcggctcctacaccaagaccgagatc
accccgacgccggggggcgagcccgaggacatccccggctattcccgctgggtggcgaac
ggcaccgcctttttcgagaagtggggcctgaatatccgtggttcggtccgttaccgctcg
accttcgtgggtgagctgtcgggcttcggcgccaaccgtgtccgccgccgcgcgatcgac
gagaccatcgtcgacggccagatcggctatgacttccaggagggcacgttcaagggcctg
tcgatcttcgtgcagggccagaacctgaccgacaccccgttcgtcaccaccaatgccggt
cgccgtgacgaggtgatcgactatcagagctatggccgccggttcctggccgggtttacc
tatcgcttctga
DBGET
integrated database retrieval system
