Sphingomonas sp. LM7: BXU08_06580
Help
Entry
BXU08_06580 CDS
T04824
Name
(GenBank) TonB-dependent receptor
KO
K02014
iron complex outermembrane recepter protein
Organism
splm
Sphingomonas sp. LM7
Brite
KEGG Orthology (KO) [BR:
splm00001
]
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
splm02000
]
BXU08_06580
Transporters [BR:
splm02000
]
Other transporters
Pores ion channels [TC:
1
]
BXU08_06580
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TonB_dep_Rec_b-barrel
Plug
OMP_b-brl_3
Motif
Other DBs
NCBI-ProteinID:
AQR75718
LinkDB
All DBs
Position
1396166..1398514
Genome browser
AA seq
782 aa
AA seq
DB search
MSSRAALSLLSASSALALTLACATPAGAAPREEGVTADTAETSDPEPENETARGTNDIVV
TAQRREQRLQEVPTTVTALSSELFSEGGIGRSANEVLNLVPNASAGTQQHGRPRWWIRGV
GAGQQQLDLANPVGFYLDDVYISNASATGLPLFDIERVEVLRGPQGTLWGKNTTGGAINV
ISKRPSLTDGADQNYVKLEYGSFDNKIAEAGVGAAIVPGVLATRISARIDDREGRFTNLF
TGEKSNAIRDSVVRGQLSLAPSPGFEALLSLHYRDYQTDGTYWTTASYAPSGLFRNGYTP
STDKDEISTNAGEFTRASQFGGSLHLDWDVGALSLTAITGYERFKTRGAGDGDYTPLEIS
RSYTQARSQQWTQELRLASPQADRLNWILGAYYFNEKIVSNAYSATLPAGSVLAQPGSTA
PAAYSLARYDHKAKSGAAFGSATFDFTDAAKLTVGARWTRETKTLDFDRSASPGAAATAW
SNYAHWWDSYTGSFGGIGTFSGDLRRTWDAFTYDVTPSWTVAPDNLVYFKYSHGVKSGGF
NTAATLPVALVAVEPEELDAFELGYKSQWFDRRLTFNATLFHYDYHNVQINVVGPNPGAV
GGATVSYLQNAEKAHVNGAELELEATPVDGLRLTGAVGILDTKYDELQVVNGGADLSGAR
FVRAPKLTLNGSATYTIPLASSGSIDLTADARYTSRQFYYITPQDTVNRYLLTQKGYTIA
NARISYTAPNERFTLSAFVNNLLDTEYLNHSLPAANAAQAITGDTVAWADPRTYGVSFIT
RF
NT seq
2349 nt
NT seq
+upstream
nt +downstream
nt
ctgtccagtcgcgctgccctgtctctcctgtcagcgtcgagtgcgctggcgctcacgctg
gcctgcgcgacccccgcgggcgcagcgcctcgcgaagagggcgtcacggcggacaccgcg
gagaccagcgatccggaacccgagaacgaaactgcgcgcgggaccaacgacatcgtcgtc
accgcgcagcgccgcgagcagcgccttcaggaagtgccgactacggtaaccgcgctcagc
tccgagctgttcagcgaaggcggcatcggccgctcggcgaacgaagtgctcaacctcgtg
cccaacgcatcggcaggcacccagcagcacggccgcccacgctggtggatccgcggagtc
ggcgccggccagcagcaactcgatctcgccaatccggtcggtttctatctcgacgacgtc
tacatcagcaacgccagcgccaccggcctgccgctgttcgatatcgagcgcgtcgaagtg
ctccgcgggccgcagggcactttatggggcaagaacaccaccggcggcgcgatcaacgtg
atctcgaagcgcccgtcgcttaccgacggcgccgaccagaattacgtgaagctcgaatat
ggcagcttcgataacaagatcgccgaggccggcgtgggcgctgcgatcgtgccgggcgtg
ctggccacccgtatctcggcgcgcatcgatgaccgcgagggccgcttcaccaatttgttc
accggcgagaagtccaacgcgatccgtgacagcgtcgtgcgagggcagctgtcgcttgcc
ccttcgccggggttcgaggcgctattgagcctccattaccgcgactatcagaccgacggc
acttattggaccaccgcgagctatgcaccgagcgggctgttccgcaacggctacacgccc
tcgaccgacaaggatgaaatcagcaccaatgccggcgaattcacccgcgcctcgcaattc
ggcggatcgctgcatctcgactgggacgtcggcgcgctctcgctgaccgccatcaccggc
tatgagcggttcaagacgcgcggcgccggcgacggcgactacaccccgctcgaaatctca
cgcagctacacccaggcgcgcagccagcaatggactcaggagcttcgacttgcctccccg
caggcggaccggctcaactggatcctcggcgcctattatttcaacgagaagatcgtctcg
aacgcctattcggcgacgctgccggcggggtcggtgctcgcgcagccgggcagcactgcg
cccgcggcgtacagcctggcccgctacgaccacaaggcgaagagcggcgcggcgttcggc
agcgcaaccttcgacttcaccgacgcggcgaagctgacggtcggcgcgcgctggacccgc
gagaccaagacgctcgatttcgatcgcagcgcctcgccgggcgccgccgcgactgcgtgg
agcaactacgcccattggtgggacagctataccggcagctttggcgggatcgggaccttc
tccggagatctgcggagaacctgggacgccttcacctacgacgtgacgccgtcctggacc
gtcgctcccgacaatttggtctacttcaaatactcgcacggcgttaagtccggcggtttc
aacactgccgcgacactgcccgtcgcgctggttgcggtggagccggaggaactcgatgcg
ttcgagctaggctataagtcacaatggttcgatcggcgcctcaccttcaacgccaccttg
ttccactatgactaccacaatgtccaaatcaacgtagtcggccccaaccccggcgccgtc
ggaggtgcgaccgtttcctatctccagaatgcggaaaaggcgcacgtcaacggcgccgaa
ctggagctggaagcgacgccggtcgacgggctgcggctgaccggcgcggtcggcatcctc
gacaccaaatatgacgagctgcaagtggtgaacggcggcgccgatctgtcgggcgcgcgc
ttcgtccgcgcgcccaagctgacactcaacggcagcgcgacttacaccatcccgctcgcc
agcagcggcagcatcgatctcaccgccgacgcacgttacacctcgcgccaattctattac
atcacgccgcaggacacggtgaaccgctatctgctgacccagaagggctatacgatcgcc
aatgcgcggatcagctacaccgcgccgaacgaacgcttcacgctctcggccttcgtcaac
aatctgctcgataccgagtatctcaaccattcgctgcccgcggccaacgctgcccaggcg
atcaccggcgacaccgtcgcctgggccgatccgcggacgtacggcgtgtcgttcatcacg
cggttctaa
DBGET
integrated database retrieval system
