Streptomyces pluripotens: LK06_026480
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Entry
LK06_026480 CDS
T04845
Name
(GenBank) ribonuclease D
KO
K03684
ribonuclease D [EC:
3.1.13.5
]
Organism
splu
Streptomyces pluripotens
Brite
KEGG Orthology (KO) [BR:
splu00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
splu03016
]
LK06_026480
Enzymes [BR:
splu01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.5 ribonuclease D
LK06_026480
Transfer RNA biogenesis [BR:
splu03016
]
Prokaryotic type
3'processing and CCA adding factors
3'processing factors
LK06_026480
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Gene cluster
GFIT
Motif
Pfam:
DNA_pol_A_exo1
DNA_pol_A_exoN
HRDC
Motif
Other DBs
NCBI-ProteinID:
ARP72925
UniProt:
A0A221P4G7
LinkDB
All DBs
Position
complement(5984163..5985452)
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AA seq
429 aa
AA seq
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MTDAQDTAADSSLRPRGGTPPDDAGSSVPGAPVPLLEPREGIPPVIADGPALTEVITAFA
AGTGPVAVDAERASGYRYGQRAYLVQLRRAGAGTALIDPVACPDLSGLGEALSGVEWVLH
AATQDLPCLREIGMVPTGLFDTELAGRLAGFPRVGLGAMVEGVLGYVLEKGHSAVDWSTR
PLPEPWLRYAALDVELLVDLRDALEKELDRQGKLEWALEEFSAIAAAPPTEPRKDPWRRT
SGMHKVRRRRQLAVVRELWQTRDRIAQRRDVSPGKVLSDAAIVEAALSLPGNVHALAALN
GFSNRTGRRQLEQWQAAVDRAKALPDSALPQPGQPVTGPPPPRAWADKDPAAAARLSAAR
AGVSALAEQLHMPQENLASPDTVRRVCWEPPAVVDAGSVGAALAGYGARPWQVELVTPVL
VTALATTGA
NT seq
1290 nt
NT seq
+upstream
nt +downstream
nt
gtgaccgacgcccaagacaccgcagcagacagttccctgcgccccaggggaggcactcct
cctgatgacgccggatcttctgtgccgggggcaccggttcccttgctcgaaccccgcgag
ggcattccacccgtgatcgccgacggaccggccctcactgaggtgatcaccgccttcgcc
gccggcaccggccccgtggccgtggacgccgagcgcgcctccggctaccgctacggccag
cgcgcctacctggttcagctgcgccgcgcgggtgccggtaccgcgttgatcgaccccgtc
gcctgccccgacctctcgggactcggcgaggccctgtccggcgtcgagtgggtgctgcac
gcggccacccaggacctcccctgcctgcgcgagataggcatggtcccgaccgggctcttc
gacaccgagctggccggccgactcgccgggttcccccgtgtgggcctgggcgcgatggtc
gagggtgtcctcggctacgtcctggagaagggccactccgccgtcgactggtccacccga
ccgctgcccgagccgtggctgcgctacgcggccctggacgtcgaactcctcgtcgacctg
cgcgacgccctggagaaggagctggaccggcagggcaagctggagtgggccctggaggag
ttcagcgccatcgcggccgcgccgccgaccgaaccgaggaaggatccctggcgccggacg
tccgggatgcacaaggtacgacggcgccggcaactcgccgtcgtgagggagctgtggcag
acacgggaccggatcgcgcagcggcgggacgtgtcaccgggcaaggtgctgagcgacgcg
gccatcgtggaggccgcgctctccctgcccggaaacgtgcatgcgctcgccgcgctgaac
gggttcagcaaccgaacgggacgacggcaactggagcagtggcaggcggccgtggaccgg
gccaaggcccttcccgacagtgcgctgccacagccgggacagcccgtgaccgggccgccg
cctcctcgggcctgggcagacaaggaccccgcagccgcggcccggctgtccgctgcccgg
gccggggtctcggccctcgctgagcagctccatatgcctcaggagaacctggcctcgccg
gacaccgtgcggcgggtctgctgggagccgcccgccgtggtggacgccgggtcggtgggg
gccgcactggcgggctacggggctcggccgtggcaggtcgaactggtcacccccgtgctg
gtgaccgcgctcgccacgaccggggcctga
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