Serratia inhibens: Q5A_025065
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Entry
Q5A_025065 CDS
T04576
Symbol
hldD
Name
(GenBank) ADP-L-glycero-D-manno-heptose-6-epimerase
KO
K03274
ADP-L-glycero-D-manno-heptose 6-epimerase [EC:
5.1.3.20
]
Organism
sply
Serratia inhibens
Pathway
sply00540
Lipopolysaccharide biosynthesis
sply01100
Metabolic pathways
sply01250
Biosynthesis of nucleotide sugars
Module
sply_M00064
ADP-L-glycero-D-manno-heptose biosynthesis
Brite
KEGG Orthology (KO) [BR:
sply00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00540 Lipopolysaccharide biosynthesis
Q5A_025065 (hldD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01005 Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Q5A_025065 (hldD)
Enzymes [BR:
sply01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.20 ADP-glyceromanno-heptose 6-epimerase
Q5A_025065 (hldD)
Lipopolysaccharide biosynthesis proteins [BR:
sply01005
]
Core region
Q5A_025065 (hldD)
BRITE hierarchy
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Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Epimerase
GDP_Man_Dehyd
3Beta_HSD
RmlD_sub_bind
Polysacc_synt_2
NAD_binding_4
ThiF
KR
adh_short
Motif
Other DBs
NCBI-ProteinID:
ANS45405
UniProt:
A0A1B1KY76
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All DBs
Position
5359452..5360381
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AA seq
309 aa
AA seq
DB search
MIIVTGGAGMIGSNIIKALNDTGYRDILVVDNLKDGTKFANLVDLDIADYIDKEDFIANI
VAGDDLGEIDAVFHEGACSSTTEWDGKYMMDNNYQYSKDLLHYCLDREIPFLYASSAATY
GGREEFIEERQFEEPLNVYGYSKFLFDQYVREILPEADSQICGFRYFNVYGPREGHKGSM
ASVAFHLNSQINRGENPKLFDGSQDFKRDFIYVGDVAAVNLWFWKSGVSGIFNCGTGRAE
TFQAVADAVVDFHQKGAVENIPFPEKLKGRYQAFTQADLTKLRAAGYDAPFKTVAEGVKE
YMAWLNRTA
NT seq
930 nt
NT seq
+upstream
nt +downstream
nt
atgattatcgttactggtggcgccggcatgatcggcagcaatatcattaaggcgctgaat
gacacagggtatcgcgatatcctggtggtagataacctgaaagacggcaccaaattcgcc
aatctggtcgatctggatatcgccgactatatcgataaagaagattttatcgccaacatc
gtggccggtgacgatctgggtgaaatcgacgcggtgttccatgaaggtgcctgttcatct
accaccgagtgggatggcaagtacatgatggacaacaactatcagtactccaaagacctg
ctgcattattgcctggatcgcgaaatcccgttcctgtacgcctcgtcggcagccacctac
ggcggccgtgaagaatttatcgaagagcgccagtttgaagagccgctgaatgtgtacggt
tactcaaaattcctgttcgatcagtacgtgcgtgaaattctgcctgaggcggattcacag
atctgcggcttccgttacttcaacgtttatggcccgcgcgaaggccacaaaggcagcatg
gccagcgttgcattccacctgaatagccagatcaaccgcggcgagaacccgaaactgttc
gacggcagccaggacttcaagcgtgactttatctacgtcggcgacgtggcggcggtaaac
ctgtggttctggaaaagcggcgtgtccggcatcttcaactgcggcaccggccgtgcagaa
accttccaggcggtagccgacgcggtagtcgatttccaccagaaaggcgcggtggaaaat
atcccgttcccggaaaaactcaaaggccgctaccaggcgtttacccaggctgacctgacc
aagctgcgcgctgccggctatgatgcgccgttcaaaacggtcgccgaaggcgtgaaagag
tacatggcctggttgaaccgcaccgcttaa
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