Sphingobium sp. MI1205: K663_10295
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Entry
K663_10295 CDS
T04383
Name
(GenBank) tRNA nucleotidyltransferase (CCA-adding enzyme)
KO
K00970
poly(A) polymerase [EC:
2.7.7.19
]
Organism
spmi
Sphingobium sp. MI1205
Pathway
spmi03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
spmi00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
K663_10295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
spmi03019
]
K663_10295
Enzymes [BR:
spmi01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.19 polynucleotide adenylyltransferase
K663_10295
Messenger RNA biogenesis [BR:
spmi03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Others
K663_10295
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SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
PolyA_pol
PolyA_pol_RNAbd
tRNA_NucTran2_2
Motif
Other DBs
NCBI-ProteinID:
AMK18436
UniProt:
A0A126R8Y4
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All DBs
Position
1:2125964..2127175
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AA seq
403 aa
AA seq
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MTAFLPDAQWRHRPGLDGLLAALEVEQGLVRYVGGAVRDGLLGLPVSDLDIATVLEPRAV
VNHLKAAGIKAVPTGIDHGTITAVIGGWPVEITTLRRDVSTDGRRATIAYTSDWREDAAR
RDFTINALYADPLTLEITDYFGGVADLEAGRVRFIGSAAARIAEDHLRILRYFRFLARFG
RDMPDDEAYAACRAAANSLMALSRERIADELLKLLALPSPLASLRLMIDGGILIPVLPEI
GSGGIARVEQLIAREAASATPPAALRRLAALLPPDPRTADLVGARLKLSNKVRKRLVLAL
DGDAAGISPRALAFHIGVEGAIDRILLDPAAPVESLQPLEGWTPPQLPIGGGALIARGLT
PGPDVAKALGEVQRLWVEEGFPDADRVGQIADQTVSKFQRARQ
NT seq
1212 nt
NT seq
+upstream
nt +downstream
nt
atgaccgccttcttgcctgacgcgcaatggcgtcaccggccggggctggacggcctgctc
gccgcgctggaggtggaacagggcctcgtccgctatgttggcggcgcggtgcgcgacggc
ctgctgggcctgcctgtcagcgacctcgacatcgcgaccgtgctggaaccacgcgccgtc
gtgaaccatctgaaggcggcaggaataaaggcggtgccgaccggcatcgaccatggcacc
atcaccgccgtcatcggcggctggcccgtggagatcaccaccctacgccgggacgtcagc
accgacggccgccgggccaccatcgcctataccagcgactggcgggaggacgccgcgcgc
cgcgacttcacgataaatgcgctttatgccgacccgctcacccttgaaataaccgactat
ttcggcggcgtggcggacctggaggcaggccgcgtccgctttatcggcagcgccgccgcg
cggattgcggaggatcatctgcggatcctgcgctatttccgcttcctcgcgcgcttcggc
cgggacatgcccgatgatgaagcctatgccgcctgccgcgccgccgccaacagcctgatg
gccctgtcgcgcgagcgtatcgccgatgaattgctgaaactgctcgccctgccttcaccg
ctcgcctcgctgcgcctgatgatcgacggcgggatactcatcccggtgctgccggaaatc
ggctcgggcgggattgcgcgggtggaacaattgattgcgcgcgaagccgcctcagcgacg
ccgcccgcagccctgcgccgccttgcagcgctgctgccgccagacccgcgcaccgccgat
ctggtcggcgctcgcctgaaattgtcgaacaaggtgcgcaagcgcctcgttctggcgctc
gatggcgacgcggccggcatttcacccagggcactcgcctttcacatcggcgtggaaggc
gcgatcgaccgcattctgctcgaccccgccgctccagtcgaaagcctccagccgcttgaa
gggtggaccccgccgcaattgcccatcggcggcggcgcgcttattgcgcggggcctgacg
cccggcccggatgtggccaaggcgcttggtgaagtgcaacgcctgtgggtggaagaaggc
tttcccgacgcagaccgtgtcggccagatcgccgatcagaccgtttcgaagttccagcgc
gcacgccagtaa
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