Streptococcus pneumoniae gamPNI0373 (virulent serotype 1): HMPREF1038_00411
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Entry
HMPREF1038_00411 CDS
T02334
Symbol
rmlC
Name
(GenBank) dTDP-4-dehydrorhamnose 3,5-epimerase
KO
K01790
dTDP-4-dehydrorhamnose 3,5-epimerase [EC:
5.1.3.13
]
Organism
spng
Streptococcus pneumoniae gamPNI0373 (virulent serotype 1)
Pathway
spng00521
Streptomycin biosynthesis
spng00523
Polyketide sugar unit biosynthesis
spng00541
O-Antigen nucleotide sugar biosynthesis
spng01100
Metabolic pathways
spng01110
Biosynthesis of secondary metabolites
spng01250
Biosynthesis of nucleotide sugars
Brite
KEGG Orthology (KO) [BR:
spng00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
HMPREF1038_00411 (rmlC)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
HMPREF1038_00411 (rmlC)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
HMPREF1038_00411 (rmlC)
Enzymes [BR:
spng01000
]
5. Isomerases
5.1 Racemases and epimerases
5.1.3 Acting on carbohydrates and derivatives
5.1.3.13 dTDP-4-dehydrorhamnose 3,5-epimerase
HMPREF1038_00411 (rmlC)
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Motif
Pfam:
dTDP_sugar_isom
Motif
Other DBs
NCBI-ProteinID:
AFS42487
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Position
358953..359549
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AA seq
198 aa
AA seq
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MTDNFFGKTLAARKVEAIPGMLEFDIPVHGDNRGWFKENFQKEKVLPLGFPESFFAEGKL
QNNVSFSRKNVLRGLHAEPWDKYISVADGGKVLGSWVDLREGETFGNTYQTVIDASKGIF
VPRGVANGFQVLSDTVSYSYLVNDYWALELKPKYAFVNYADPSLGIEWENLEEADVSEAD
KHHPLLKDVKPLKKEDLE
NT seq
597 nt
NT seq
+upstream
nt +downstream
nt
atgacagataattttttcggtaagacgcttgcggcacgcaaggttgaagctattccaggc
atgttggagtttgatatccccgttcatggagataatcgtggctggtttaaagaaaatttc
caaaaggaaaaagtgcttccacttggatttccagagtctttctttgcagaaggaaaattg
caaaacaatgtatccttctcacgtaaaaatgtccttcgaggcctccacgcagagccttgg
gataagtacatctctgtagcagatggagggaaagttctgggttcttgggttgatctacgc
gagggtgaaacctttgggaatacctatcagacagtaattgatgcaagcaagggaatcttt
gttcctcgaggcgtagctaatggcttccaagttttatcagatacagtgtcatatagctat
ctggtcaatgattactgggctcttgaactcaaacccaagtatgcctttgtgaactacgct
gatccaagccttggtattgaatgggaaaatctggaagaagcagacgtatctgaagcagac
aaacatcatcccctacttaaggacgtgaagcctttgaaaaaagaagatttggaataa
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