Schizosaccharomyces pombe (fission yeast): SPBC1105.10
Help
Entry
SPBC1105.10 CDS
T00076
Symbol
rav1
Name
(RefSeq) RAVE complex subunit Rav1
KO
K24155
rabconnectin-3a
Organism
spo
Schizosaccharomyces pombe (fission yeast)
Brite
KEGG Orthology (KO) [BR:
spo00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
spo04131
]
SPBC1105.10 (rav1)
Membrane trafficking [BR:
spo04131
]
Exocytosis
Small GTPases and associated proteins
Rab associated proteins
SPBC1105.10 (rav1)
Endosome - Lysosome transport
Acidification regulators
Rabconnectin-3 complex
SPBC1105.10 (rav1)
RAVE complex
SPBC1105.10 (rav1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Rav1p_C
Motif
Other DBs
NCBI-GeneID:
2539705
NCBI-ProteinID:
NP_596466
PomBase:
SPBC1105.10
Ensembl:
SPBC1105.10
UniProt:
Q9Y817
LinkDB
All DBs
Position
II:3524531..3528845
Genome browser
AA seq
1297 aa
AA seq
DB search
MPLAFTNPGTPLKRTAAYDNVQWNQNRILTFGTRYTVLIIVNNYESYQNIQFGESIGAVA
LDQRTGFLAIAHGQVLDIYKPADSLKWTHHYNYITQLSEDITQLSWGYNFDLLLCASSYT
KLINFSEDKPRLVWSQNRISDSFLSSTISSDACFIASIETKNPLAKVWQRTSPQGTVSSC
DDFSYLVHPCRVRFSQWSKHLHPDASGSTPFLSTVGYDNVLRIWQVGSRFGSQLMHLSCF
LNLRKYYKSDQPPYCCFIDKDDFTIALAHAISRHSGQVHKDRILNRLLALASGQPHIFLL
FTFECLYIFSLVIDQETLSSFELINQVPTNFPKGALQPDGFIPIYRTSKHEFYDYNIILF
FQNSAREYMFSLTDFFYSDFELRVSYDFYGHDYPIKSLTRTSNGHGIVSRDVNRICMFQS
YISQDGKNQLICRFRLLLGESDFILPLYAGEYAAVLNLNSLKLWHCNEAIPPTLLCTCRQ
VPTSPIITFFILPVQNNDNSALCALTEGGHAWFWSVSNEAHDGSAVLRFIDRVNFTKNLN
IASAVDVMGWSSTLNLSSLSSFDQEVFQSISKDGLLQTWMARVLGDDKAEISEISKVQTS
IKSATMIKGSTSKKVAVVSENNRRLSIFDTRSSEFSEKEEFSSVFDDYGPINDLDWTSTP
NSHSILAVGFLHDVILLCQNRRSYMNDIPCWSRIRRYNLLEYTNSLISDSSWLDNGTLVT
AIGNGLFYFDNSLPEDQSLLFPASLKRSAKNIFDLAYQLNGILPVFHPQLLQQLLLRNQP
FLFTNILLRFYLCLKDDVDMHFLLNMDCSEFYCCDEEISKDLLIKSLSQNSAEILNPAEL
DFEETSVSKHLGLYIDEMIKKLTALLKVKKVKTLTRSSQFLLLNLIEAFNKARALRDSLD
LNGKRYCIMLNQYVLSKHQRQLTSLPTREMAWAFHSSNKAVLLDHTKKLHGKPLLWNAVE
EYAIPFWLNEQLLKDVFLELSRNHYAEIDDRNPENVSLYHIALHKINVFRDLWRLASWHK
ESARTVKLLSNDFSKKKWKVVASKNAFALLSKHRYFYASAFFLLADSCYDAAKVCIRNLK
SISLAIAMTRVYEGDDGPTLKRLINEYVLPLAVSQNDRWLTNWSFTILKQEKKALQSLVS
PIRSLVSDNDFIQLYTSDKNDQEIHENKDSQRNSTNEPVRNKFPSDDPAFILLYECLRSS
NVQIDESLEYRFVLHNANVYCQLGCDLIALGLLRNWKFQKNPATAHLETEDYMVTDKQSA
VEKTHDSPKLGKTLMGQDIRPTPDDVPEFNESAFSFE
NT seq
3894 nt
NT seq
+upstream
nt +downstream
nt
atgcctctggcattcacaaatcccggtacacctctaaaacgtacagctgcctacgacaat
gtacaatggaaccaaaatcgaatattaacatttggaactcgctataccgtattaattatt
gtaaataactacgaatcttatcaaaatatacaatttggagagtctattggtgcagtggct
ttggaccaacgtacggggtttctagcaatagcacatggacaagttttggatatttataag
cccgccgattctttgaaatggactcatcattacaattatataactcagctttctgaagat
attactcaactatcttggggatacaattttgatctgttgctttgtgcttcgtcatacact
aaacttataaatttctctgaagacaaacccaggttggtttggtcgcagaacagaatctcg
gattcattccttagtagcactatttcttccgatgcttgttttatagcttctatcgaaaca
aaaaatccacttgctaaagtttggcagcgaacatctcctcaaggtacagttagctcatgt
gatgatttcagctatcttgttcatccttgtcgcgtaaggttttcccaatggtctaaacac
cttcatccggacgccagtggatcgactcccttcctgagtacggtaggctatgataacgtt
ctaagaatttggcaagttggtagccgatttggttctcaattaatgcatctttcttgtttt
cttaacttgagaaaatactacaaatctgatcaaccaccatactgctgttttattgataag
gacgattttactatagcattagcacatgctataagtcgccattctggtcaagtgcataag
gatcgcattttaaataggcttctggctttggccagtggacaaccacatatatttttgcta
tttacttttgaatgtttgtacatattttctctagtaattgaccaggaaactttgtcatct
tttgagcttattaatcaagttccaacgaactttcccaaaggcgctcttcaacctgacgga
tttatacctatttacaggacctcaaaacacgaattttacgattataacatcattttattt
tttcaaaattccgcccgtgaatacatgtttagtcttaccgatttcttttatagtgacttt
gagttaagagttagttacgatttttatggacatgattatcccataaaaagcttaacaaga
acctctaatggtcatggaattgtatcccgagatgttaatcgtatctgtatgtttcaatca
tacatatcgcaagacgggaaaaatcagttaatttgcaggttcagattattacttggagaa
tctgactttatattacctctttatgctggtgaatatgcagcagtactcaacttaaattct
ttaaaattatggcattgcaatgaagcaattcctccaacccttctctgtacatgtcgtcaa
gtccctactagtccgataataaccttctttattcttcctgttcaaaacaacgataattcc
gccctatgtgctttgacggaaggaggccatgcctggttttggagtgtctctaacgaagct
catgatggttctgctgtacttcggtttatagatcgggtaaattttacaaagaatttaaat
atcgcatcggctgtagatgtcatgggttggtcttctactttaaatttgagcagtttatct
tcatttgatcaagaggtatttcaatcaatatcaaaagacggtttattacagacttggatg
gcaagagtattgggagacgataaagcggaaatatcggaaatttccaaagtgcaaactagc
atcaaatctgcaactatgatcaaaggctcaacatccaagaaagttgctgttgtatctgag
aacaatcgtcgactttcaattttcgacacgcgtagttcagaattctctgaaaaggaagaa
ttttcctctgtttttgatgattatggaccaataaatgacttggattggacttctactccc
aattcccattctatcttggctgttggctttctacatgatgttattcttttgtgccaaaat
cgccgatcttatatgaacgatattccatgttggtctcgtattcgtagatacaatctttta
gaatatacaaattcattaatatctgactcttcttggttggataatgggactttagttact
gccattggtaacggacttttttattttgataattcacttcccgaagatcagtctttactg
ttccctgcatcattgaaacgttccgcaaaaaatatttttgatcttgcataccagcttaat
ggaattttaccagtttttcatcctcaattgttgcagcagcttttacttagaaaccaaccc
tttctatttactaatattttgctaaggttttacttgtgtttgaaagatgatgtagatatg
cattttctcttaaatatggactgcagtgagttttactgctgtgacgaagaaatttctaaa
gaccttttaataaaaagtctcagccaaaattctgcggaaattctaaatcctgcggaattg
gattttgaagagaccagtgtctcaaagcatttaggattatacattgatgaaatgataaag
aagttgactgcattattaaaagtaaagaaagtcaaaaccctcactcgatcatctcagttt
ttacttcttaatttaatcgaggcattcaataaggcaagagcattgcgagattcattggac
ctcaacggaaaaagatattgcattatgctaaaccagtacgttttatcaaaacatcaacgt
caattaacaagcttgcccacccgagagatggcgtgggcttttcatagctctaacaaagct
gttctgttggaccacactaaaaagcttcatggaaaaccattgttatggaatgctgttgaa
gaatatgcgataccgttttggctaaatgagcagctactgaaagatgtatttttagagctg
tctcgcaatcattacgctgagattgacgataggaacccagagaatgttagtttatatcac
attgctctacacaaaataaatgtatttcgtgatctttggcgtcttgctagttggcataag
gaatcagctcgaacggttaagttgctttcgaatgacttttcaaaaaagaagtggaaagtg
gttgcatccaagaatgcttttgcacttttaagcaagcacagatatttttatgcttctgca
ttttttcttttggcagatagttgctatgatgccgcaaaagtatgtatccgtaatttaaaa
agcatttcattagccatcgcaatgactcgagtctatgaaggcgacgatggtccgacctta
aagaggctaataaacgagtatgtacttcctttggctgtatctcaaaacgatagatggctc
accaattggagtttcactattttaaaacaggaaaaaaaggccttgcaaagtttggtatct
cccattcgctcgctggtcagcgataatgactttatacaactttatacatccgataaaaac
gaccaagaaattcacgaaaataaagattcacaacgaaatagtactaacgaacccgtacga
aataagtttccgtctgatgatcctgccttcattttgttatatgaatgtttaagatccagc
aacgtgcaaattgatgaaagtcttgaatatcgatttgttttgcataatgctaatgtgtat
tgccaattaggatgtgacctaatagcacttgggcttttgcgtaattggaaattccaaaaa
aatcctgcaactgctcatcttgaaactgaggattatatggtaactgacaagcagtctgca
gtggaaaaaactcacgactcccccaaacttggaaaaactcttatgggacaagatatccgg
ccaacaccggacgatgtccccgaatttaatgaatctgcgttcagcttcgagtaa
DBGET
integrated database retrieval system
