Shewanella polaris: FH971_05705
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Entry
FH971_05705 CDS
T06579
Symbol
rfbD
Name
(GenBank) dTDP-4-dehydrorhamnose reductase
KO
K00067
dTDP-4-dehydrorhamnose reductase [EC:
1.1.1.133
]
Organism
spol
Shewanella polaris
Pathway
spol00521
Streptomycin biosynthesis
spol00523
Polyketide sugar unit biosynthesis
spol00541
O-Antigen nucleotide sugar biosynthesis
spol01100
Metabolic pathways
spol01110
Biosynthesis of secondary metabolites
spol01250
Biosynthesis of nucleotide sugars
Module
spol_M00793
dTDP-L-rhamnose biosynthesis
Brite
KEGG Orthology (KO) [BR:
spol00001
]
09100 Metabolism
09107 Glycan biosynthesis and metabolism
00541 O-Antigen nucleotide sugar biosynthesis
FH971_05705 (rfbD)
09109 Metabolism of terpenoids and polyketides
00523 Polyketide sugar unit biosynthesis
FH971_05705 (rfbD)
09110 Biosynthesis of other secondary metabolites
00521 Streptomycin biosynthesis
FH971_05705 (rfbD)
Enzymes [BR:
spol01000
]
1. Oxidoreductases
1.1 Acting on the CH-OH group of donors
1.1.1 With NAD+ or NADP+ as acceptor
1.1.1.133 dTDP-4-dehydrorhamnose reductase
FH971_05705 (rfbD)
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Motif
Pfam:
RmlD_sub_bind
Epimerase
GDP_Man_Dehyd
3Beta_HSD
Polysacc_synt_2
NAD_binding_4
DapB_N
Motif
Other DBs
NCBI-ProteinID:
QDE30517
UniProt:
A0A4Y5YD12
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Position
1284850..1285728
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AA seq
292 aa
AA seq
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MKILVTGKNGQIGSSLVAQLNTMPDVTLLALDRDQLDITDSINVNKIVAEFNPNIIINAA
AYTGVDKAEQQPELAYAVNRDGPYNLAIAANQINAAIIHISTDYVFAGDSAECYVETDNT
EPQTGYGRSKLAGEQAVISACSRHIILRTAWVFGEHGNNFVKTMLRLAKTRDALDVVADQ
FGGPTYAGDIATAIVTISKQIVNGNQAYGLYHFSGFPYISWHAFALQIVDVALEQGVLTH
SIQVNPITTQDYPTAAKRPANSRLNCHKIERAFGIQQSDWQAALTRVKDYLS
NT seq
879 nt
NT seq
+upstream
nt +downstream
nt
atgaaaatattggttaccggtaaaaatggccaaattggcagtagcttggttgcgcaactc
aacactatgcctgatgtcactctgttagcattagatcgtgaccaacttgatattaccgac
tctattaacgtcaataaaattgtcgcagagttcaacccgaatattattattaatgccgct
gcttatactggggttgataaggctgagcaacaacctgaattggcttatgcagttaatcgt
gatggcccttataaccttgccattgccgctaaccaaatcaatgcagccattatccatata
tcaaccgattatgtttttgctggggatagtgcagagtgttatgtcgaaacggataatacc
gaacctcaaactgggtatggccgtagtaaactggctggtgaacaagccgttattagcgcg
tgttcacggcatattatattaagaacggcttgggtatttggtgaacatggcaataatttt
gttaaaaccatgctacgccttgctaaaactagagatgctttagatgtggttgctgatcaa
tttggtggcccaacctatgcgggtgatattgcaacagcgatagtgacaatctcgaaacag
atcgttaacggtaatcaggcctatgggctatatcatttttctggtttcccttatattagc
tggcatgcttttgcgctgcagatagttgacgttgcattagagcaaggtgtactgacacac
tcaattcaagttaatcccataacgactcaagactatcctacagcagctaaacgccctgca
aactcacgattaaattgccataaaattgagcgtgcttttggtattcaacaaagtgattgg
caagcagcgttaacaagagttaaagactatttatcatga
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